RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 NUP88Q99567 741 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 DSCC1Q9BVC3 393 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 SELENOOQ9BVL4 669 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 C22orf23Q9BZE7 217 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 ASCC2Q9H1I8 757 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 ADAMTS10Q9H324 1103 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 EPB41L4AQ9HCS5 686 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 NLRC4Q9NPP4 1024 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 CHST7Q9NS84 486 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 AATFQ9NY61 560 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 SLAMF8Q9P0V8 285 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 PGAP2Q9UHJ9 254 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 PALD1Q9ULE6 856 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 ZBTB21Q9ULJ3 1066 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 IPPQ9Y573 584 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 PCDHAC2Q9Y5I4 1007 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 RBM8AQ9Y5S9 174 aaKnown RBP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 PHIPQ8WWQ0 1821 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 GAKO14976 1311 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 FRMPD2Q68DX3 1309 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-205ENST00000462254 ZNF541Q9H0D2 1346 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 DOCK1Q14185 1865 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 MYH15Q9Y2K3 1946 aa5.38□□□□□ -1.55
CSMD3-205ENST00000462254 TRPM7Q96QT4 1865 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 PTPRFP10586 1907 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 MYBL2P10244 700 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 VCAM1P19320 739 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 CD247P20963 164 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 HSPA4P34932 840 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 BTDP43251 543 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 IRAK1P51617 712 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ZNF445P59923 1031 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ERVK-21P61565 698 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 STK3Q13188 491 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ARHGAP29Q52LW3 1261 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ANKRD39Q53RE8 183 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 CIAPIN1Q6FI81 312 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 C1orf131Q8NDD1 294 aaKnown RBP5.37□□□□□ -1.55
CSMD3-205ENST00000462254 VPS37AQ8NEZ2 397 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 SH3RF3Q8TEJ3 882 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-205ENST00000462254 SDR42E1Q8WUS8 393 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 BRF1Q92994 677 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 TNIP3Q96KP6 325 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ALPK1Q96QP1 1244 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 UPF2Q9HAU5 1272 aaKnown RBP5.37□□□□□ -1.55
CSMD3-205ENST00000462254 RC3H2Q9HBD1 1191 aaKnown RBP5.37□□□□□ -1.55
CSMD3-205ENST00000462254 GP6Q9HCN6 339 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ANLNQ9NQW6 1124 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 EBF1Q9UH73 591 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 FAM50BQ9Y247 325 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 SNX14Q9Y5W7 946 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 ZMYM6O95789 1325 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 MYO3BQ8WXR4 1341 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 PARP14Q460N5 1801 aa5.37□□□□□ -1.55
CSMD3-205ENST00000462254 SRCAPQ6ZRS2 3230 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 GPR75-ASB3A0A0A6YYF3 556 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ABHD14A-ACY1A0A1B0GW23 586 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 TCRBV16S1A1N1A0A5B0 115 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 SMIM22K7EJ46 135 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 SLC27A2O14975 620 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 PMM2O15305 246 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 NBNO60934 754 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 LTFP02788 710 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 EPHX1P07099 455 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ASGR2P07307 311 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 CYP21A2P08686 494 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 GRIA2P42262 883 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 AK2P54819 239 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 GSTO1P78417 241 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 TEKQ02763 1124 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ALX1Q15699 326 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 GPR162Q16538 588 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ADCK5Q3MIX3 580 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 CREB3L3Q68CJ9 461 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 C1orf228Q6PIY5 440 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 HHIPL2Q6UWX4 724 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 MMS22LQ6ZRQ5 1243 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 STOX1Q6ZVD7 989 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 FAM43AQ8N2R8 423 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ZNF655Q8N720 491 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 ZNF513Q8N8E2 541 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 AGBL3Q8NEM8 1001 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 PPHLN1Q8NEY8 458 aaKnown RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 PTPRN2Q92932 1015 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 TEKT1Q969V4 418 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 MAGEB10Q96LZ2 347 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 FGD4Q96M96 766 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 FOXP3Q9BZS1 431 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 DCP1AQ9NPI6 582 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 RNF181Q9P0P0 153 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 DDX20Q9UHI6 824 aaKnown RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 SLC4A4Q9Y6R1 1079 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 RPAP1Q9BWH6 1393 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-205ENST00000462254 TCHHQ07283 1943 aa5.36□□□□□ -1.55
CSMD3-205ENST00000462254 CYP2D7A0A087X1C5 515 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 TMEM82A0PJX8 343 aa5.35□□□□□ -1.55
CSMD3-205ENST00000462254 FKTNO75072 461 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms