RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 FAM20AQ96MK3 541 aa9.49□□□□□ -0.89
BRCA1-205ENST00000461221 MRPL4Q9BYD3 311 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 RANBP17Q9H2T7 1088 aaKnown RBP9.49□□□□□ -0.89
BRCA1-205ENST00000461221 ASXL2Q76L83 1435 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 M0R3G1 203 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 TLR2O60603 784 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 STAT3P40763 770 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ALDH18A1P54886 795 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 GFPT1Q06210 699 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 KCNH2Q12809 1159 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 NCAPHQ15003 741 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 MTFR1Q15390 333 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ANO4Q32M45 955 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 EFL1Q7Z2Z2 1120 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 FAM162AQ96A26 154 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 C19orf60Q96EN9 201 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PRPF18Q99633 342 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 MLXIPLQ9NP71 852 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF302Q9NR11 478 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 UVRAGQ9P2Y5 699 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 MYO1GB0I1T2 1018 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 DFFAO00273 331 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 AGTP01019 485 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 CDC27P30260 824 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 CDK8P49336 464 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 E4F1Q66K89 784 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 CHMP1BQ7LBR1 199 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 KRT35Q92764 455 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PUS3Q9BZE2 481 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 TJP2Q9UDY2 1190 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ABCB11O95342 1321 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 TMED10P49755 219 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 HPCAP84074 193 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ANGPT1Q15389 498 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 FAM102AQ5T9C2 384 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PID1Q7Z2X4 250 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PAPOLBQ9NRJ5 636 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 GID8Q9NWU2 228 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 MAP3K20Q9NYL2 800 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 STK36Q9NRP7 1315 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 KLHL2O95198 593 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 ASNSP08243 561 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 NUP62P37198 522 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 SIK1P57059 783 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 COASYQ13057 564 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 CYLC2Q14093 348 aaPredicted RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 KNOP1Q1ED39 458 aaKnown RBP9.48□□□□□ -0.89
BRCA1-205ENST00000461221 SPDYAQ5MJ70 313 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 DTX3LQ8TDB6 740 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 CYGBQ8WWM9 190 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 AGBL1Q96MI9 1066 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 SPATA16Q9BXB7 569 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 PITPNM2Q9BZ72 1349 aa9.48□□□□□ -0.89
BRCA1-205ENST00000461221 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 SRGAP2O75044 1071 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 MOCS2O96007 188 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ENO1P06733 434 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 CLK1P49759 484 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 IRX1P78414 480 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 SETD3Q86TU7 594 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF589Q86UQ0 364 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 EME1Q96AY2 570 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TRABDQ9H4I3 376 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DBNDD1Q9H9R9 158 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TSR3Q9UJK0 312 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 C3orf70A6NLC5 250 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ADORA2BP29275 332 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 CDH6P55285 790 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 NCALDP61601 193 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 KRR1Q13601 381 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TRIP4Q15650 581 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ZSWIM5Q9P217 1185 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 GDAQ9Y2T3 454 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 A8MXQ7 604 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ZBTB5O15062 677 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 FKBP9O95302 570 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 USP17L8P0C7I0 530 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ARSEP51690 589 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 KRT17Q04695 432 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TBL3Q12788 808 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 EIF2B5Q13144 721 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DRAP1Q14919 205 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms