RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PPFIBP1Q86W92 1011 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 MYCT1Q8N699 235 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 PHF7Q9BWX1 381 aaPredicted RBP14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ZHX3Q9H4I2 956 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 MAGEF1Q9HAY2 307 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 PARVGQ9HBI0 331 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 SSX2IPQ9Y2D8 614 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 USP15Q9Y4E8 981 aaPredicted RBP14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 BDP1A6H8Y1 2624 aa14.55□□□□□ -0.08
RAB11FIP3-207ENST00000461009 A0A1B0GUA9 196 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 PRR33A8MZF0 331 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 N4BP3O15049 544 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CTSAP10619 480 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ARF4P18085 180 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 STRN3Q13033 797 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 AMHR2Q16671 573 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 LRRC15Q8TF66 581 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 DDX12PQ92771 950 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 KHSRPQ92945 711 aaKnown RBP eCLIP14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 DHX58Q96C10 678 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 REEP2Q9BRK0 252 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ADPGKQ9BRR6 497 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 EMILIN2Q9BXX0 1053 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CHMP5Q9NZZ3 219 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ARHGAP28Q9P2N2 729 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 USP25Q9UHP3 1055 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 KCNH3Q9ULD8 1083 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 GIT1Q9Y2X7 761 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 IPPQ9Y573 584 aa14.54□□□□□ -0.08
RAB11FIP3-207ENST00000461009 A0A087X0B3 334 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 MEIS3P2A8K0S8 358 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 SLC16A4O15374 487 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 POMCP01189 267 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ITIH3Q06033 890 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 UBXN11Q5T124 520 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 SLC27A1Q6PCB7 646 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ELMSAN1Q6PJG2 1045 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 DYMQ7RTS9 669 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 RNF135Q8IUD6 432 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CEP57L1Q8IYX8 460 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 NECTIN4Q96NY8 510 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 KIFC3Q9BVG8 833 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 CCDC113Q9H0I3 377 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 ZBP1Q9H171 429 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 DZANK1Q9NVP4 752 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 SEL1LQ9UBV2 794 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 IRAK3Q9Y616 596 aa14.53□□□□□ -0.08
RAB11FIP3-207ENST00000461009 A0A1W2PQ27 194 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 A0A1W2PQ64 194 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 A0A1W2PQD8 194 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 FAM86C2PA6NEL3 165 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 ARL5CA6NH57 179 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 MYMKA6NI61 221 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 B4GALT5O43286 388 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 TRAK2O60296 914 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 CLASP2O75122 1294 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 GAP43P17677 238 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 OR1G1P47890 313 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 SLC11A1P49279 550 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 ZNF131P52739 623 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 CBX2Q14781 532 aaPredicted RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 E2F4Q16254 413 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 HAUS6Q7Z4H7 955 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 CCDC65Q8IXS2 484 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 SMG8Q8ND04 991 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 TMEM161BQ8NDZ6 487 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 VN1R2Q8NFZ6 395 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 RPGRIP1Q96KN7 1286 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 RIPOR3Q96MK2 946 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 GAD1Q99259 594 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 COLEC11Q9BWP8 271 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 APOL6Q9BWW8 343 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 EIF2AQ9BY44 585 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 MRPL4Q9BYD3 311 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 MRPL17Q9NRX2 175 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 DNAJB4Q9UDY4 337 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 DPP7Q9UHL4 492 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 NR2E1Q9Y466 385 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 HCFC2Q9Y5Z7 792 aa14.52□□□□□ -0.09
RAB11FIP3-207ENST00000461009 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 LOC730098B7Z3J9 87 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 NRP1O14786 923 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 DDHD2O94830 711 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 NPTXRO95502 500 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 MAPTP10636 758 aaKnown RBP14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 IDEP14735 1019 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 KLRC2P26717 231 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 MLH1P40692 756 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 NCKAP1LP55160 1127 aa14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 RBM10P98175 930 aaKnown RBP14.51□□□□□ -0.09
RAB11FIP3-207ENST00000461009 KCNC3Q14003 757 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms