RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 PRRC2BQ5JSZ5 2229 aaKnown RBP24.54■■□□□ 1.52
C9orf3-209ENST00000460573 A0A0B4J269 797 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 LINC01553A4QN01 128 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 TBKBP1A7MCY6 615 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 OFD1O75665 1012 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 CLLU1OSQ5K130 101 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 SLC39A4Q6P5W5 647 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 HELQQ8TDG4 1101 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 ASB2Q96Q27 587 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 GBP3Q9H0R5 595 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 RNF39Q9H2S5 420 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 CGNQ9P2M7 1197 aaKnown RBP24.54■■□□□ 1.52
C9orf3-209ENST00000460573 KANSL3Q9P2N6 904 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 PARP2Q9UGN5 583 aa24.54■■□□□ 1.52
C9orf3-209ENST00000460573 CUL9Q8IWT3 2517 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 ANKRD63C9JTQ0 380 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 INPPL1O15357 1258 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 GARTP22102 1010 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 KNOP1Q1ED39 458 aaKnown RBP24.53■■□□□ 1.52
C9orf3-209ENST00000460573 KIAA0895Q8NCT3 520 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 FBXO22Q8NEZ5 403 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 URGCPQ8TCY9 931 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 CLSTN2Q9H4D0 955 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 TOPORSQ9NS56 1045 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-209ENST00000460573 SNTG2Q9NY99 539 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
C9orf3-209ENST00000460573 MEIS3P2A8K0S8 358 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 KIAA0391O15091 583 aaKnown RBP24.52■■□□□ 1.52
C9orf3-209ENST00000460573 OGTO15294 1046 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 PTMSP20962 102 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 YARSP54577 528 aaKnown RBP24.52■■□□□ 1.52
C9orf3-209ENST00000460573 ERVK-21P61565 698 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 NOMO2Q5JPE7 1267 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 ZNF658Q5TYW1 1059 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-209ENST00000460573 SPRED2Q7Z698 418 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 THNSL1Q8IYQ7 743 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 LRRC43Q8N309 656 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 MSTO1Q9BUK6 570 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 APOL6Q9BWW8 343 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 RWDD3Q9Y3V2 267 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 PRUNE2Q8WUY3 3088 aa24.52■■□□□ 1.52
C9orf3-209ENST00000460573 LDHAP00338 332 aaKnown RBP24.51■■□□□ 1.51
C9orf3-209ENST00000460573 POU3F3P20264 500 aaPredicted RBP24.51■■□□□ 1.51
C9orf3-209ENST00000460573 AKAP5P24588 427 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 HOXD13P35453 343 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 GATMP50440 423 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 CAMK4Q16566 473 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 COBLL1Q53SF7 1204 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 HS2ST1Q7LGA3 356 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 GUF1Q8N442 669 aaKnown RBP24.51■■□□□ 1.51
C9orf3-209ENST00000460573 GOLGA5Q8TBA6 731 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 GPT2Q8TD30 523 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 POMGNT1Q8WZA1 660 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 ERCC4Q92889 916 aaPredicted RBP24.51■■□□□ 1.51
C9orf3-209ENST00000460573 SAMD11Q96NU1 681 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 ACAP3Q96P50 834 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 HAPLN2Q9GZV7 340 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 NUP62CLQ9H1M0 184 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 KIAA1468Q9P260 1216 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 GDAQ9Y2T3 454 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 CHD9Q3L8U1 2897 aa24.51■■□□□ 1.51
C9orf3-209ENST00000460573 CARNS1A5YM72 827 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 ARL5CA6NH57 179 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 RECQL4O94761 1208 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 CLTAP09496 248 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 HARSP12081 509 aaKnown RBP24.5■■□□□ 1.51
C9orf3-209ENST00000460573 POU5F1Q01860 360 aaKnown RBP24.5■■□□□ 1.51
C9orf3-209ENST00000460573 PAN2Q504Q3 1202 aaKnown RBP24.5■■□□□ 1.51
C9orf3-209ENST00000460573 NELFCDQ8IXH7 590 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 CLP1Q92989 425 aaKnown RBP24.5■■□□□ 1.51
C9orf3-209ENST00000460573 RPS6KC1Q96S38 1066 aa24.5■■□□□ 1.51
C9orf3-209ENST00000460573 AGO2Q9UKV8 859 aaKnown RBP24.5■■□□□ 1.51
C9orf3-209ENST00000460573 FNDC1Q4ZHG4 1894 aaPredicted RBP24.49■■□□□ 1.51
C9orf3-209ENST00000460573 TGFB1I1O43294 461 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 ADSSP30520 456 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 MLH1P40692 756 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 HSP90AA2PQ14568 343 aaPredicted RBP24.49■■□□□ 1.51
C9orf3-209ENST00000460573 PTPROQ16827 1216 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 ARMCX5Q6P1M9 558 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 CEP120Q8N960 986 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 TRIML1Q8N9V2 468 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 GAD1Q99259 594 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 C17orf80Q9BSJ5 609 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 PLEKHA5Q9HAU0 1116 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 TYW1Q9NV66 732 aaKnown RBP24.49■■□□□ 1.51
C9orf3-209ENST00000460573 LMCD1Q9NZU5 365 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 COG5Q9UP83 839 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 INPP5FQ9Y2H2 1132 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 NLRC5Q86WI3 1866 aa24.49■■□□□ 1.51
C9orf3-209ENST00000460573 TISP43B9A030 160 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 PDXKO00764 312 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 FAM189A1O60320 539 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 PPP1R2P41236 205 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 OSTNP61366 133 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 ADAMTS19Q8TE59 1207 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 IKZF4Q9H2S9 585 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 AAASQ9NRG9 546 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 TBC1D13Q9NVG8 400 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 MAN1B1Q9UKM7 699 aa24.48■■□□□ 1.51
C9orf3-209ENST00000460573 MRPL42Q9Y6G3 142 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms