RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 POMCP01189 267 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 GRM5P41594 1212 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 MCL1Q07820 350 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 BMT2Q1RMZ1 405 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 ISM2Q6H9L7 571 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 CEP120Q8N960 986 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
CCDC12-204ENST00000460035 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 GSDMAQ96QA5 445 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 TGS1Q96RS0 853 aaKnown RBP11.86□□□□□ -0.51
CCDC12-204ENST00000460035 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 HAPLN2Q9GZV7 340 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 SEMA6BQ9H3T3 888 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 KANSL3Q9P2N6 904 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
CCDC12-204ENST00000460035 STYXL1Q9Y6J8 313 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 VWA8A3KMH1 1905 aa11.86□□□□□ -0.51
CCDC12-204ENST00000460035 OGTO15294 1046 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 RECQL4O94761 1208 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 HOXD13P35453 343 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 MLH1P40692 756 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 AFF1P51825 1210 aaKnown RBP11.85□□□□□ -0.51
CCDC12-204ENST00000460035 SLC39A4Q6P5W5 647 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 LRRC55Q6ZSA7 311 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 TMEM192Q8IY95 271 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 FAM212AQ96EL1 285 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 ZFP42Q96MM3 310 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 MRPL9Q9BYD2 267 aaKnown RBP11.85□□□□□ -0.51
CCDC12-204ENST00000460035 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 MIOSQ9NXC5 875 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
CCDC12-204ENST00000460035 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 TRANK1O15050 2925 aa11.85□□□□□ -0.51
CCDC12-204ENST00000460035 A0A0B4J269 797 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CLIC2O15247 247 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 KIF20AO95235 890 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CLTAP09496 248 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 LINC00271P0C7V0 271 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 ADSSP30520 456 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 MCM4P33991 863 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CTNNB1P35222 781 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 BMPR1AP36894 532 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 SCNN1GP51170 649 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 ERVK-21P61565 698 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 KYAT1Q16773 422 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 Q7L0L9 218 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 HS2ST1Q7LGA3 356 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 SPRED2Q7Z698 418 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 CWH43Q9H720 699 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 RPF1Q9H9Y2 349 aaKnown RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 MAN1B1Q9UKM7 699 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 RWDD3Q9Y3V2 267 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
CCDC12-204ENST00000460035 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
CCDC12-204ENST00000460035 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 RFXAPO00287 272 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 BIN1O00499 593 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 FAM189A1O60320 539 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ZC3H11AO75152 810 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 DDHD2O94830 711 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 LDHAP00338 332 aaKnown RBP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ALDH2P05091 517 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 THP07101 528 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 LAG3P18627 525 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 GARTP22102 1010 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 TNFSF9P41273 254 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ACOT2P49753 483 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 SNRPFP62306 86 aaKnown RBP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 GRIN2CQ14957 1233 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 EPC2Q52LR7 807 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ZBTB41Q5SVQ8 909 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 ZNF280BQ86YH2 543 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 SMYD4Q8IYR2 804 aaPredicted RBP11.83□□□□□ -0.52
CCDC12-204ENST00000460035 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 GPT2Q8TD30 523 aa11.83□□□□□ -0.52
CCDC12-204ENST00000460035 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms