RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 NXF3Q9H4D5 531 aaKnown RBP17.15■□□□□ 0.34
SDF4-204ENST00000459994 PRKAG3Q9UGI9 489 aa17.15■□□□□ 0.34
SDF4-204ENST00000459994 MTCL1Q9Y4B5 1905 aaKnown RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 MYMKA6NI61 221 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 GUCY2CP25092 1073 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 AFMP43652 599 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 ALDH7A1P49419 539 aaKnown RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 KRT17Q04695 432 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 DHX8Q14562 1220 aaKnown RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 VPS52Q8N1B4 723 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 ZFP42Q96MM3 310 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 RUSC1Q9BVN2 902 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 APOL6Q9BWW8 343 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 TRIM9Q9C026 710 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 PUF60Q9UHX1 559 aaKnown RBP17.14■□□□□ 0.33
SDF4-204ENST00000459994 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
SDF4-204ENST00000459994 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 LRRIQ4A6NIV6 560 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 CLASP2O75122 1294 aaKnown RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 CA8P35219 290 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 MLH1P40692 756 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 RNASELQ05823 741 aaKnown RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 TFDP1Q14186 410 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 SMC1AQ14683 1233 aaKnown RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 POSTNQ15063 836 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 CCDC183Q5T5S1 534 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 ANKRD54Q6NXT1 300 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 TMEM184AQ6ZMB5 413 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 GRAMD1CQ8IYS0 662 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 MRPL43Q8N983 215 aaKnown RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 SUSD6Q92537 303 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 STAMQ92783 540 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 TMEM169Q96HH4 297 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 GAD1Q99259 594 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 NGRNQ9NPE2 291 aaKnown RBP17.13■□□□□ 0.33
SDF4-204ENST00000459994 MARCH5Q9NX47 278 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 CACNG4Q9UBN1 327 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 FAM50BQ9Y247 325 aa17.13■□□□□ 0.33
SDF4-204ENST00000459994 TRIOO75962 3097 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 NPTXRO95502 500 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 CXCL14O95715 111 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 ITGA4P13612 1032 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 AKAP5P24588 427 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 SCNN1GP51170 649 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 DPYDQ12882 1025 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 NOTUMQ6P988 496 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 TAS1R1Q7RTX1 841 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 DDX53Q86TM3 631 aaKnown RBP17.12■□□□□ 0.33
SDF4-204ENST00000459994 GSTCDQ8NEC7 633 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 MCPH1Q8NEM0 835 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 DDX12PQ92771 950 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 DNAJC19Q96DA6 116 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 MUTYHQ9UIF7 546 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 HCFC2Q9Y5Z7 792 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 TECTAO75443 2155 aa17.12■□□□□ 0.33
SDF4-204ENST00000459994 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
SDF4-204ENST00000459994 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.11■□□□□ 0.33
SDF4-204ENST00000459994 PVALEFA0A1B0GWK0 134 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 ARL5CA6NH57 179 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 NRP1O14786 923 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 GPR37L1O60883 481 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
SDF4-204ENST00000459994 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CTSAP10619 480 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 AXLP30530 894 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CUL4BQ13620 913 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 GIT2Q14161 759 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CAMK4Q16566 473 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
SDF4-204ENST00000459994 CAVIN1Q6NZI2 390 aaKnown RBP17.11■□□□□ 0.33
SDF4-204ENST00000459994 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
SDF4-204ENST00000459994 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 KLK14Q9P0G3 267 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CNTNAP2Q9UHC6 1331 aa17.11■□□□□ 0.33
SDF4-204ENST00000459994 CITO14578 2027 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 DOCK6Q96HP0 2047 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 INPPL1O15357 1258 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 SMC2O95347 1197 aa17.1■□□□□ 0.33
SDF4-204ENST00000459994 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms