RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TSHZ1Q6ZSZ6 1077 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 GPD1LQ8N335 351 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 MSTO1Q9BUK6 570 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 EIF2AQ9BY44 585 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 NFKBIZQ9BYH8 718 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 GPR88Q9GZN0 384 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 TRPV6Q9H1D0 765 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 IMPACTQ9P2X3 320 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 CPSF3Q9UKF6 684 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 AGO2Q9UKV8 859 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 REXO2Q9Y3B8 237 aaKnown RBP9.51□□□□□ -0.89
RIF1-208ENST00000457745 UMODL1Q5DID0 1318 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 RALGAPA2Q2PPJ7 1873 aa9.51□□□□□ -0.89
RIF1-208ENST00000457745 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 FAM170AA1A519 330 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 AKR1B15C9JRZ8 316 aaPredicted RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 EXTL3O43909 919 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 FGFR1OPO95684 399 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 GNA14O95837 355 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 GNRH1P01148 92 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 DARSP14868 501 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 PHKA2P46019 1235 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 GUCY2FP51841 1108 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 MAP2K1Q02750 393 aaPredicted RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 MCL1Q07820 350 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 STRN3Q13033 797 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 PRPF4BQ13523 1007 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 TFDP1Q14186 410 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 MBTPS1Q14703 1052 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 PSMD6Q15008 389 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 ENOX2Q16206 610 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 MAPK6Q16659 721 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 FAM187BQ17R55 369 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 TCTN1Q2MV58 587 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 FAM47CQ5HY64 1035 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 PDXDC1Q6P996 788 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 ZPBP2Q6X784 338 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 TOGARAM2Q6ZUX3 1019 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 SERINC5Q86VE9 423 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 FAM228AQ86W67 206 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 ZBTB8OSQ8IWT0 167 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 THNSL1Q8IYQ7 743 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 C7orf31Q8N865 590 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 RETREG2Q8NC44 543 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 SLC17A8Q8NDX2 589 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 GOLGA5Q8TBA6 731 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 KIAA1524Q8TCG1 905 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 DESI2Q9BSY9 194 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 PI4K2AQ9BTU6 479 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 MRPL4Q9BYD3 311 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 HMX1Q9NP08 348 aaPredicted RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 NLRC4Q9NPP4 1024 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 ABHD10Q9NUJ1 306 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 CAPN11Q9UMQ6 739 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 TFR2Q9UP52 801 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 TNFSF13BQ9Y275 285 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 NOC2LQ9Y3T9 749 aaKnown RBP9.5□□□□□ -0.89
RIF1-208ENST00000457745 HES2Q9Y543 173 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 CDY2AQ9Y6F7 541 aa9.5□□□□□ -0.89
RIF1-208ENST00000457745 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 PCNTO95613 3336 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 LRRC53A6NM62 1247 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 MEIS3P2A8K0S8 358 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ESPNB1AK53 854 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 H0YCG3 227 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ZNF263O14978 683 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 MAPK13O15264 365 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ASAP2O43150 1006 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 MGEA5O60502 916 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 B4GALT4O60513 344 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 TOM1L1O75674 476 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ABL1P00519 1130 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 NFICP08651 508 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 NUDT7P0C024 238 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CXCL8P10145 99 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 SKILP12757 684 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 CCL5P13501 91 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 KRT9P35527 623 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 EFNA5P52803 228 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 POLR2FP61218 127 aaKnown RBP9.49□□□□□ -0.89
RIF1-208ENST00000457745 MYL7Q01449 175 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 POU5F1BQ06416 359 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 GPNMBQ14956 572 aa9.49□□□□□ -0.89
RIF1-208ENST00000457745 NOLC1Q14978 699 aaKnown RBP eCLIP9.49□□□□□ -0.89
RIF1-208ENST00000457745 ZNF568Q3ZCX4 644 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms