RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DLATP10515 647 aaKnown RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 CYP11B1P15538 503 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 ALDH5A1P51649 535 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 POLGP54098 1239 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 CDR2Q01850 454 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 POU5F1Q01860 360 aaKnown RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 SEPT14Q6ZU15 432 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 RIOX2Q8IUF8 465 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 ELMO3Q96BJ8 720 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 RNPC3Q96LT9 517 aaKnown RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 RPS6KC1Q96S38 1066 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 RUFY1Q96T51 708 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 FAM213AQ9BRX8 229 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 PORCNQ9H237 461 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 LRRC37A2A6NM11 1700 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 GOLGA6CA6NDK9 693 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 GOLGA6DP0CG33 693 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 CAPN2P17655 700 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 HSPA9P38646 679 aaKnown RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 PDE6CP51160 858 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 CD302Q8IX05 232 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 FAM76AQ8TAV0 307 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 TMEM143Q96AN5 459 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 FAM84AQ96KN4 292 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 ZIM3Q96PE6 472 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 NIFKQ9BYG3 293 aaKnown RBP17.95■□□□□ 0.46
CCDC43-202ENST00000457422 GOLGA6AQ9NYA3 693 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 CALCOCO1Q9P1Z2 691 aa17.95■□□□□ 0.46
CCDC43-202ENST00000457422 MMEP08473 750 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 EDNRBP24530 442 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 NAMPTP43490 491 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 LIG4P49917 911 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 GUCY2FP51841 1108 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 PSMD6Q15008 389 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 ASAP3Q8TDY4 903 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 PSPC1Q8WXF1 523 aaKnown RBP17.94■□□□□ 0.46
CCDC43-202ENST00000457422 DDX1Q92499 740 aaKnown RBP17.94■□□□□ 0.46
CCDC43-202ENST00000457422 ALG3Q92685 438 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 CEP89Q96ST8 783 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 GTF3C4Q9UKN8 822 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 SBF1O95248 1867 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 CYP1A2P05177 515 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 ARL2P36404 184 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 PTENP60484 403 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-202ENST00000457422 DHX38Q92620 1227 aaKnown RBP17.94■□□□□ 0.46
CCDC43-202ENST00000457422 AMACRQ9UHK6 382 aa17.94■□□□□ 0.46
CCDC43-202ENST00000457422 UBA1P22314 1058 aaKnown RBP17.93■□□□□ 0.46
CCDC43-202ENST00000457422 STRN3Q13033 797 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 UBL4BQ8N7F7 174 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 PIK3R5Q8WYR1 880 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 TATDN2Q93075 761 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 ZSWIM1Q9BR11 485 aa17.93■□□□□ 0.46
CCDC43-202ENST00000457422 TMEM110-MUSTN1A8MSY1 372 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 ADM5C9JUS6 153 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 ATMINO43313 823 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 GLRA2P23416 452 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 HNRNPH2P55795 449 aaKnown RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 C1orf131Q8NDD1 294 aaKnown RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 ZNF516Q92618 1163 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 PI4K2AQ9BTU6 479 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 UVRAGQ9P2Y5 699 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 CHORDC1Q9UHD1 332 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 GOLGA6L10A0A0M3HER8 536 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 GRIN3BO60391 1043 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 SHOX2O60902 331 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 FARP2O94887 1054 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 HSPA6P17066 643 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 RFC5P40937 340 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 HLTFQ14527 1009 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC43-202ENST00000457422 ZACNQ401N2 412 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 NAA35Q5VZE5 725 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 SLC7A3Q8WY07 619 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 CD101Q93033 1021 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 WNT8AQ9H1J5 351 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 CSADQ9Y600 493 aa17.92■□□□□ 0.46
CCDC43-202ENST00000457422 GSTTP1A0A1W2PQM5 241 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 SOWAHBA6NEL2 793 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 NLRP11P59045 1033 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 ZNF211Q13398 564 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 TARBP2Q15633 366 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 TTMPQ5BVD1 217 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 LMBRD2Q68DH5 695 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 SLFN12LQ6IEE8 588 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 ACAD10Q6JQN1 1059 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 ZNF564Q8TBZ8 553 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 PCYT2Q99447 389 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 FAM114A2Q9NRY5 505 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 C1orf112Q9NSG2 853 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 AGO2Q9UKV8 859 aaKnown RBP17.91■□□□□ 0.46
CCDC43-202ENST00000457422 NR2E1Q9Y466 385 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 LRRIQ4A6NIV6 560 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 TTI1O43156 1089 aa17.91■□□□□ 0.46
CCDC43-202ENST00000457422 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms