RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 EME1Q96AY2 570 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ETNK1Q9HBU6 452 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 CAPN11Q9UMQ6 739 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MYCNP04198 464 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 SPOPLQ6IQ16 392 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 NEK5Q6P3R8 708 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 C15orf40Q8WUR7 153 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TGS1Q96RS0 853 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEE1Q9HCI5 957 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 KRT82Q9NSB4 513 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ABHD10Q9NUJ1 306 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ZFYVE16Q7Z3T8 1539 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 HNRNPDLO14979 420 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 CNOT3O75175 753 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 ZBED1O96006 694 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 GARTP22102 1010 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 AARS2Q5JTZ9 985 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 HP1BP3Q5SSJ5 553 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 TMCO4Q5TGY1 634 aa5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PNPT1Q8TCS8 783 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 EZH1Q92800 747 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 WDR12Q9GZL7 423 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 DNAAF2Q9NVR5 837 aaKnown RBP5.5□□□□□ -1.53
CSMD3-204ENST00000455883 PCNX1Q96RV3 2341 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FAM95CA0A1B0GW59 222 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CD3EAPO15446 510 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ACOT12Q8WYK0 555 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FAM20AQ96MK3 541 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 KLHL31Q9H511 634 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RIC8BQ9NVN3 520 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 IP6K2Q9UHH9 426 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RAD54BQ9Y620 910 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 DOCK11Q5JSL3 2073 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 C6orf229H3BNL8 230 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM24O15164 1050 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ATN1P54259 1190 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RAD23AP54725 363 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RESP18Q5W5W9 173 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FBXO38Q6PIJ6 1188 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TBC1D1Q86TI0 1168 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NLRP14Q86W24 1093 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RHOT1Q8IXI2 618 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NR1H4Q96RI1 486 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 LZTS3O60299 673 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 P4HBP07237 508 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ANXA6P08133 673 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 GFPT1Q06210 699 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 KLHL7Q8IXQ5 586 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 KANSL2Q9H9L4 492 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PANK4Q9NVE7 773 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RABGEF1Q9UJ41 708 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PI4KAP42356 2102 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 METP08581 1390 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RBM47A0AV96 593 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TBC1D12O60347 775 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ITGA10O75578 1167 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FMNL1O95466 1100 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 GRK2P25098 689 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RECQLP46063 649 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 POLE2P56282 527 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PDIA5Q14554 519 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 GPBP1Q86WP2 473 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 BDH2Q9BUT1 245 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TMEM63CQ9P1W3 806 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PCDHA7Q9UN72 937 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MTMR7Q9Y216 660 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 E7EWF7 191 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF197O14709 1029 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RPS6KA5O75582 802 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CDK7P50613 346 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PIGHQ14442 188 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PTF1AQ7RTS3 328 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CABP7Q86V35 215 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 SCFD2Q8WU76 684 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ANKRD7Q92527 254 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 SCYL1Q96KG9 808 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TESK2Q96S53 571 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 VPS16Q9H269 839 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 STK39Q9UEW8 545 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FAM189A2Q15884 450 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TMEM35BQ8NCS4 154 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CHCHD6Q9BRQ6 235 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 WHRNQ9P202 907 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FBXO40Q9UH90 709 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CORO2BQ9UQ03 480 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 LMTK2Q8IWU2 1503 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MBD5Q9P267 1494 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PSTPIP1O43586 416 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TTLL1O95922 423 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MMRN1Q13201 1228 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 FAM43BQ6ZT52 329 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ASAP3Q8TDY4 903 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 OSBPL1AQ9BXW6 950 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ANTXR1Q9H6X2 564 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 COG4Q9H9E3 785 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 G3BP2Q9UN86 482 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ZFC3H1O60293 1989 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CHD5Q8TDI0 1954 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms