RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GLIPR1L2Q4G1C9 344 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 SEZ6Q53EL9 994 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 TWF2Q6IBS0 349 aaKnown RBP15.29■□□□□ 0.04
SHMT2-203ENST00000449049 THNSL1Q8IYQ7 743 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 APBB2Q92870 758 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 TUBGCP2Q9BSJ2 902 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 ITGB8P26012 769 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 MTIF2P46199 727 aaKnown RBP15.29■□□□□ 0.04
SHMT2-203ENST00000449049 MRE11P49959 708 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 FANCCQ00597 558 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 BFSP1Q12934 665 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 BRSK2Q8IWQ3 736 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 SEPT8Q92599 483 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 TRIM6Q9C030 488 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-203ENST00000449049 FAM105AQ9NUU6 356 aa15.29■□□□□ 0.04
SHMT2-203ENST00000449049 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-203ENST00000449049 CCDC85CA6NKD9 419 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 AP5Z1O43299 807 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 CLTAP09496 248 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 STAG3L1P0CL83 205 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 KRT13P13646 458 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 RAG1P15918 1043 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 COPB1P53618 953 aaKnown RBP15.28■□□□□ 0.04
SHMT2-203ENST00000449049 PSMD6Q15008 389 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 MAN2A1Q16706 1144 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 TMEM192Q8IY95 271 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
SHMT2-203ENST00000449049 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 ADAM2Q99965 735 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 RGS18Q9NS28 235 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 TAB2Q9NYJ8 693 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 IPPQ9Y573 584 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 SERPINC1P01008 464 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 RAB27AP51159 221 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 OSTNP61366 133 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 PPP2R3AQ06190 1150 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
SHMT2-203ENST00000449049 MIIPQ5JXC2 388 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 MFSD5Q6N075 450 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 TNS4Q8IZW8 715 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 DBF4BQ8NFT6 615 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 SLC35C1Q96A29 364 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 VWCEQ96DN2 955 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 NXF3Q9H4D5 531 aaKnown RBP15.28■□□□□ 0.04
SHMT2-203ENST00000449049 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
SHMT2-203ENST00000449049 LTBP2Q14767 1821 aa15.27■□□□□ 0.04
SHMT2-203ENST00000449049 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-203ENST00000449049 ZNF623O75123 536 aa15.27■□□□□ 0.04
SHMT2-203ENST00000449049 VAMP7P51809 220 aa15.27■□□□□ 0.04
SHMT2-203ENST00000449049 PARD3BQ8TEW8 1205 aa15.27■□□□□ 0.04
SHMT2-203ENST00000449049 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-203ENST00000449049 TSPYL2Q9H2G4 693 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-203ENST00000449049 RPF1Q9H9Y2 349 aaKnown RBP15.27■□□□□ 0.04
SHMT2-203ENST00000449049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHMT2-203ENST00000449049 ANK1P16157 1881 aa15.27■□□□□ 0.03
SHMT2-203ENST00000449049 A0A0U1RQF3 1178 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 A0A1B0GTH6 734 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 WNT7BP56706 349 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 CLDN10P78369 228 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 TCTN1Q2MV58 587 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 C1orf220Q5T0J3 134 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 MRPL10Q7Z7H8 261 aaKnown RBP15.26■□□□□ 0.03
SHMT2-203ENST00000449049 USP37Q86T82 979 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 RTN4RL1Q86UN2 441 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-203ENST00000449049 C7orf61Q8IZ16 206 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 NAP1L5Q96NT1 182 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-203ENST00000449049 ACAP3Q96P50 834 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 HES2Q9Y543 173 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 C9IYK1 514 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 IL18RAPO95256 599 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 CXCL8P10145 99 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 SKIP12755 728 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 DLG4P78352 724 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 SURF1Q15526 300 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 DCAF17Q5H9S7 520 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-203ENST00000449049 TMEM199Q8N511 208 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 VPS16Q9H269 839 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 IFNKQ9P0W0 207 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 PRKAG2Q9UGJ0 569 aa15.26■□□□□ 0.03
SHMT2-203ENST00000449049 TTC26A0AVF1 554 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 LRRIQ3A6PVS8 624 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-203ENST00000449049 LGALS16A8MUM7 142 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 TPM2P07951 284 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 UBASH3AP57075 661 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 FAM189BP81408 668 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 CNKSR3Q6P9H4 555 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 SLC24A5Q71RS6 500 aa15.25■□□□□ 0.03
SHMT2-203ENST00000449049 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms