RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 STXBP2Q15833 593 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 EFHC2Q5JST6 749 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ACAP3Q96P50 834 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 STK33Q9BYT3 514 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 FAM49AQ9H0Q0 323 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 DHX35Q9H5Z1 703 aaKnown RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 AGPAT5Q9NUQ2 364 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 KIF17Q9P2E2 1029 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 H0Y626 953 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 GOLGA8RI6L899 631 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 BNIP3LO60238 219 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF189O75820 626 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 RAD17O75943 681 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 TRIM16O95361 564 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 EYA4O95677 639 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 KCNA3P22001 575 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 CORO7P57737 925 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 EIF3EP60228 445 aaKnown RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 PSMC5P62195 406 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 HLFQ16534 295 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ZC3H12BQ5HYM0 836 aaKnown RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 SLC10A5Q5PT55 438 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 MTHFD1LQ6UB35 978 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 HAUS6Q7Z4H7 955 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ANKMY2Q8IV38 441 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 GIMAP8Q8ND71 665 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 DNAJC9Q8WXX5 260 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 C9orf72Q96LT7 481 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ZIM3Q96PE6 472 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 LXNQ9BS40 222 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 C2orf40Q9H1Z8 148 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-204ENST00000448183 PKD2L2Q9NZM6 624 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 SUFUQ9UMX1 484 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
NEDD9-204ENST00000448183 CCT8L1PA6NM43 557 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 ENO4A6NNW6 628 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 DEAF1O75398 565 aaPredicted RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 TMCC1O94876 653 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 HADHAP40939 763 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 TRPC1P48995 793 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 AP3M2P53677 418 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 MRPS35P82673 323 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 INPP5AQ14642 412 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 LONRF1Q17RB8 773 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 GPD1LQ8N335 351 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 OR6P1Q8NGX9 317 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 SLC35G2Q8TBE7 412 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 EIF2AK1Q9BQI3 630 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 NPHS2Q9NP85 383 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 DDX28Q9NUL7 540 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 ZHX2Q9Y6X8 837 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 ABCB11O95342 1321 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 IQGAP3Q86VI3 1631 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 CYP26A1O43174 497 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 KDM1AO60341 852 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 DAB1O75553 588 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 GUCY1A2P33402 732 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 MAP3K10Q02779 954 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 KCNA1Q09470 495 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 STX3Q13277 289 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 CEP55Q53EZ4 464 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 MMGT1Q8N4V1 131 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 NOA1Q8NC60 698 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 BEST2Q8NFU1 509 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 NSUN6Q8TEA1 469 aaKnown RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 RBAKQ9NYW8 714 aaPredicted RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 LMCD1Q9NZU5 365 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 HACD3Q9P035 362 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 PSMC3IPQ9P2W1 217 aaPredicted RBP8.21□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF229Q9UJW7 825 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 MINPP1Q9UNW1 487 aa8.21□□□□□ -1.09
NEDD9-204ENST00000448183 PNPLA7Q6ZV29 1317 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 UCHL3P15374 230 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 ERFP50548 548 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 SEC24CP53992 1094 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 NFX1Q12986 1120 aaKnown RBP8.21□□□□□ -1.1
NEDD9-204ENST00000448183 NAB2Q15742 525 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 C1orf228Q6PIY5 440 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 PID1Q7Z2X4 250 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 CATSPER3Q86XQ3 398 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 RCOR2Q8IZ40 523 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 OR2W6PQ8NHA6 318 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 AGR3Q8TD06 166 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 C7orf25Q9BPX7 421 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 COG4Q9H9E3 785 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 ZNF212Q9UDV6 495 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 TRIM10Q9UDY6 481 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 FBXO40Q9UH90 709 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 DBR1Q9UK59 544 aaKnown RBP8.21□□□□□ -1.1
NEDD9-204ENST00000448183 FEM1BQ9UK73 627 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 AURKCQ9UQB9 309 aa8.21□□□□□ -1.1
NEDD9-204ENST00000448183 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms