RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 USP37Q86T82 979 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 CEP120Q8N960 986 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 MFSD14AQ96MC6 490 aa21.24■□□□□ 0.99
SGCE-207ENST00000447873 IFIH1Q9BYX4 1025 aaKnown RBP21.24■□□□□ 0.99
SGCE-207ENST00000447873 RBAKQ9NYW8 714 aaPredicted RBP21.24■□□□□ 0.99
SGCE-207ENST00000447873 CPSF3Q9UKF6 684 aaKnown RBP21.24■□□□□ 0.99
SGCE-207ENST00000447873 VAMP7P51809 220 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 ZNF75DP51815 510 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 MIIPQ5JXC2 388 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 CCDC127Q96BQ5 260 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 EIF2AQ9BY44 585 aaKnown RBP21.23■□□□□ 0.99
SGCE-207ENST00000447873 NDST4Q9H3R1 872 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 CLTAP09496 248 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 STAG3L1P0CL83 205 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 CYP2C18P33260 490 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 CCL23P55773 120 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 NR1I3Q14994 352 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 COL13A1Q5TAT6 717 aaPredicted RBP21.23■□□□□ 0.99
SGCE-207ENST00000447873 SLC35C1Q96A29 364 aa21.23■□□□□ 0.99
SGCE-207ENST00000447873 RTN4Q9NQC3 1192 aaKnown RBP21.23■□□□□ 0.99
SGCE-207ENST00000447873 PRDM5Q9NQX1 630 aaPredicted RBP21.23■□□□□ 0.99
SGCE-207ENST00000447873 LGALS16A8MUM7 142 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 NBNO60934 754 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 PARNO95453 639 aaKnown RBP21.22■□□□□ 0.99
SGCE-207ENST00000447873 GRM5P41594 1212 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 KCNH2Q12809 1159 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 UBXN11Q5T124 520 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 BRSK2Q8IWQ3 736 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 TMC2Q8TDI7 906 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 CCDC94Q9BW85 323 aaPredicted RBP21.22■□□□□ 0.99
SGCE-207ENST00000447873 TMX1Q9H3N1 280 aa21.22■□□□□ 0.99
SGCE-207ENST00000447873 RPF1Q9H9Y2 349 aaKnown RBP21.22■□□□□ 0.99
SGCE-207ENST00000447873 AFPP02771 609 aaKnown RBP21.21■□□□□ 0.99
SGCE-207ENST00000447873 TRIM49P0CI25 452 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 TRIM49CP0CI26 452 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 DLG4P78352 724 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 UBXN1Q04323 297 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 ENPEPQ07075 957 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 PSMD6Q15008 389 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 FKBP15Q5T1M5 1219 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 TMEM192Q8IY95 271 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 PARD3BQ8TEW8 1205 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 FAM212AQ96EL1 285 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 MRFAP1L1Q96HT8 127 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 SCLYQ96I15 445 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 ACAP3Q96P50 834 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 FNBP1Q96RU3 617 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 WNT8AQ9H1J5 351 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 CITO14578 2027 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 SCN5AQ14524 2016 aa21.21■□□□□ 0.99
SGCE-207ENST00000447873 TEX33O43247 280 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 DLATP10515 647 aaKnown RBP21.2■□□□□ 0.98
SGCE-207ENST00000447873 GPNMBQ14956 572 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 ENOX2Q16206 610 aaKnown RBP21.2■□□□□ 0.98
SGCE-207ENST00000447873 PLEKHO2Q8TD55 490 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 ABHD8Q96I13 439 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 INTS13Q9NVM9 706 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 SNTG2Q9NY99 539 aa21.2■□□□□ 0.98
SGCE-207ENST00000447873 STX10O60499 249 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 CXCL8P10145 99 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 ANK1P16157 1881 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 MCCD1P59942 119 aaPredicted RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 POU5F1Q01860 360 aaKnown RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 DSC3Q14574 896 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 SURF1Q15526 300 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 SEPT8Q92599 483 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 ADAM2Q99965 735 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 FTHL17Q9BXU8 183 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 NXF3Q9H4D5 531 aaKnown RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 MMRN2Q9H8L6 949 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 PDE11AQ9HCR9 933 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 FAM105AQ9NUU6 356 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 HES2Q9Y543 173 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 IPPQ9Y573 584 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 PCDHB2Q9Y5E7 798 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 LRRIQ3A6PVS8 624 aaPredicted RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 KIAA0355O15063 1070 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 MGEA5O60502 916 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 IL18RAPO95256 599 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 TNNI1P19237 187 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 YARSP54577 528 aaKnown RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 POP1Q99575 1024 aaKnown RBP21.19■□□□□ 0.98
SGCE-207ENST00000447873 TRAIPQ9BWF2 469 aa21.19■□□□□ 0.98
SGCE-207ENST00000447873 TRIM43BA6NCK2 446 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 TIMP1P01033 207 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 PLEKHG4Q58EX7 1191 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 C1orf220Q5T0J3 134 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 HACE1Q8IYU2 909 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 SMG8Q8ND04 991 aaKnown RBP21.18■□□□□ 0.98
SGCE-207ENST00000447873 DBF4BQ8NFT6 615 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 TRIM43Q96BQ3 446 aaPredicted RBP21.18■□□□□ 0.98
SGCE-207ENST00000447873 APOL6Q9BWW8 343 aa21.18■□□□□ 0.98
SGCE-207ENST00000447873 TOPORSQ9NS56 1045 aaPredicted RBP21.18■□□□□ 0.98
SGCE-207ENST00000447873 ALPK3Q96L96 1907 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 MKI67P46013 3256 aaKnown RBP21.17■□□□□ 0.98
SGCE-207ENST00000447873 CXCL10P02778 98 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 RAG1P15918 1043 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 RFC2P35250 354 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 GCLMP48507 274 aa21.17■□□□□ 0.98
SGCE-207ENST00000447873 FMO5P49326 533 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms