RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 GLB1LQ6UWU2 654 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 ZNF280BQ86YH2 543 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 NELFCDQ8IXH7 590 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 ELOA2Q8IYF1 753 aaPredicted RBP17.53■□□□□ 0.4
USP39-205ENST00000442708 THNSL1Q8IYQ7 743 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 ABI1Q8IZP0 508 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 TBC1D13Q9NVG8 400 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
USP39-205ENST00000442708 PLXNA4Q9HCM2 1894 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 RFXAPO00287 272 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 TGFB1I1O43294 461 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 POMCP01189 267 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 MATR3P43243 847 aaKnown RBP eCLIP17.52■□□□□ 0.4
USP39-205ENST00000442708 SCNN1GP51170 649 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 PSMD2Q13200 908 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 GRIN2CQ14957 1233 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 BMT2Q1RMZ1 405 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 ZNF697Q5TEC3 545 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 GPT2Q8TD30 523 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 TGS1Q96RS0 853 aaKnown RBP17.52■□□□□ 0.4
USP39-205ENST00000442708 UBN1Q9NPG3 1134 aa17.52■□□□□ 0.4
USP39-205ENST00000442708 ATG2AQ2TAZ0 1938 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 PTGESO14684 152 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 DDHD2O94830 711 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 PBX3P40426 434 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 MYO9BQ13459 2157 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 CAMK4Q16566 473 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 EPC2Q52LR7 807 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 ALKAL1Q6UXT8 129 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 STXBP4Q6ZWJ1 553 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 SMYD4Q8IYR2 804 aaPredicted RBP17.51■□□□□ 0.39
USP39-205ENST00000442708 HACE1Q8IYU2 909 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 LRRC43Q8N309 656 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 DEFB123Q8N688 67 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 ARNTL2Q8WYA1 636 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 CBWD1Q9BRT8 395 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 MSTO1Q9BUK6 570 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 NRDE2Q9H7Z3 1164 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 TMEM206Q9H813 350 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 DNAJB4Q9UDY4 337 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 EXOC7Q9UPT5 735 aa17.51■□□□□ 0.39
USP39-205ENST00000442708 OGTO15294 1046 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 BMPR1AP36894 532 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 SLC10A6Q3KNW5 377 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 CRELD2Q6UXH1 353 aaPredicted RBP17.5■□□□□ 0.39
USP39-205ENST00000442708 APBB1IPQ7Z5R6 666 aaPredicted RBP17.5■□□□□ 0.39
USP39-205ENST00000442708 COLGALT1Q8NBJ5 622 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 CCDC34Q96HJ3 373 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 GSDMAQ96QA5 445 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 CCDC94Q9BW85 323 aaPredicted RBP17.5■□□□□ 0.39
USP39-205ENST00000442708 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 MAPK8IP1Q9UQF2 711 aa17.5■□□□□ 0.39
USP39-205ENST00000442708 UBE4BO95155 1302 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 CXCL8P10145 99 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 CTNNB1P35222 781 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 ACOT2P49753 483 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 NAB2Q15742 525 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 KNOP1Q1ED39 458 aaKnown RBP17.49■□□□□ 0.39
USP39-205ENST00000442708 XKR4Q5GH76 650 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 TMEM130Q8N3G9 435 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 URGCPQ8TCY9 931 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 POMGNT1Q8WZA1 660 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 SAAL1Q96ER3 474 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 SNX27Q96L92 541 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 ZMAT2Q96NC0 199 aaKnown RBP17.49■□□□□ 0.39
USP39-205ENST00000442708 GUCD1Q96NT3 240 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 ACAP3Q96P50 834 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 MRPL9Q9BYD2 267 aaKnown RBP17.49■□□□□ 0.39
USP39-205ENST00000442708 GBP3Q9H0R5 595 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 KCTD10Q9H3F6 313 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 PCIF1Q9H4Z3 704 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 AGPAT3Q9NRZ7 376 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 MTMR10Q9NXD2 777 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 CACNG4Q9UBN1 327 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 CPSF3Q9UKF6 684 aaKnown RBP17.49■□□□□ 0.39
USP39-205ENST00000442708 MAN1B1Q9UKM7 699 aa17.49■□□□□ 0.39
USP39-205ENST00000442708 AGO2Q9UKV8 859 aaKnown RBP17.49■□□□□ 0.39
USP39-205ENST00000442708 A0A0C4DFX4 3053 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 C5orf67F2Z3F1 127 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 LPXNO60711 386 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 SMC2O95347 1197 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 CLTAP09496 248 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 BMP6P22004 513 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 GARTP22102 1010 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 MCM4P33991 863 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 SLC11A1P49279 550 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 BCAR1P56945 870 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 RNASELQ05823 741 aaKnown RBP17.48■□□□□ 0.39
USP39-205ENST00000442708 DSC1Q08554 894 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
USP39-205ENST00000442708 GLRA4Q5JXX5 417 aa17.48■□□□□ 0.39
USP39-205ENST00000442708 SPOUT1Q5T280 376 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms