RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CEP120Q8N960 986 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 ZNF507Q8TCN5 953 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
USP1-203ENST00000442679 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 MSTO1Q9BUK6 570 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 PLVAPQ9BX97 442 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 HAPLN2Q9GZV7 340 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 GBP3Q9H0R5 595 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 IKZF4Q9H2S9 585 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
USP1-203ENST00000442679 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
USP1-203ENST00000442679 A0A0B4J269 797 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 TISP43B9A030 160 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 C5orf67F2Z3F1 127 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 EIF3DO15371 548 aaKnown RBP eCLIP13.47□□□□□ -0.253e-12■■□□□ 13.3
USP1-203ENST00000442679 LAG3P18627 525 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 SCNN1GP51170 649 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
USP1-203ENST00000442679 GPM6BQ13491 265 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 PNOCQ13519 176 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 KYAT1Q16773 422 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 SEZ6Q53EL9 994 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 SLFN12LQ6IEE8 588 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 ZNF280BQ86YH2 543 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 COLGALT1Q8NBJ5 622 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 GSTCDQ8NEC7 633 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 GDPD5Q8WTR4 605 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 ZNF558Q96NG5 402 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 ACAP3Q96P50 834 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
USP1-203ENST00000442679 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
USP1-203ENST00000442679 ZMYM2Q9UBW7 1377 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 CHD7Q9P2D1 2997 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 MYH11P35749 1972 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 H3BNC9 293 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 OGTO15294 1046 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.25
USP1-203ENST00000442679 DDHD2O94830 711 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 SMC2O95347 1197 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 CLTAP09496 248 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 HOXD13P35453 343 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 PBX3P40426 434 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
USP1-203ENST00000442679 BCAR1P56945 870 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 STK4Q13043 487 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 KCNT2Q6UVM3 1135 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.25
USP1-203ENST00000442679 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 SCFD1Q8WVM8 642 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 P2RX5Q93086 422 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 GAS2L1Q99501 681 aaPredicted RBP13.46□□□□□ -0.25
USP1-203ENST00000442679 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
USP1-203ENST00000442679 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 TOPORSQ9NS56 1045 aaPredicted RBP13.46□□□□□ -0.25
USP1-203ENST00000442679 DNAJB4Q9UDY4 337 aa13.46□□□□□ -0.25
USP1-203ENST00000442679 UBE4BO95155 1302 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 PTGESO14684 152 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 B4GALT3O60512 393 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 LPXNO60711 386 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 RHOBTB3O94955 611 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ALDH2P05091 517 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 THP07101 528 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 GALTP07902 379 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 IGFBP4P22692 258 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ADSSP30520 456 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 GRIK3Q13003 919 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ADGRE1Q14246 886 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 KCNB1Q14721 858 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ZBTB41Q5SVQ8 909 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ALKAL1Q6UXT8 129 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 NELFCDQ8IXH7 590 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 ALG13Q9NP73 1137 aaKnown RBP13.45□□□□□ -0.26
USP1-203ENST00000442679 LMBRD1Q9NUN5 540 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
USP1-203ENST00000442679 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
USP1-203ENST00000442679 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 SMIM28A0A1B0GU29 152 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 CARNS1A5YM72 827 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 GRM6O15303 877 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 FAM189A1O60320 539 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 FGF18O76093 207 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 ITGB1P05556 798 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 FOSL2P15408 326 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 GARTP22102 1010 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 PPM1AP35813 382 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 TNFSF9P41273 254 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 OR1G1P47890 313 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 SLC11A1P49279 550 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 ACOT2P49753 483 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 DSC1Q08554 894 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
USP1-203ENST00000442679 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms