RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 TMEM120BA0PK00 339 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 O00370 1275 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 SUN1O94901 812 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 ATP5DP30049 168 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 KCNJ1P48048 391 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 BNIP1Q12981 228 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 LONRF1Q17RB8 773 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 RDH13Q8NBN7 331 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 ARHGEF2Q92974 986 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 STAMBPL1Q96FJ0 436 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 PLCD4Q9BRC7 762 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 DDX23Q9BUQ8 820 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 FGFR1OP2Q9NVK5 253 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 TCP11X1B4DZS4 312 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 GJB6O95452 261 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 VAMP7P51809 220 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 SLC8A3P57103 927 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 RNF207Q6ZRF8 634 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 EP400NLQ6ZTU2 488 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 DAW1Q8N136 415 aa16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 ZNF564Q8TBZ8 553 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 CHORDC1Q9UHD1 332 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-202ENST00000439510 A0A1B0GUA9 196 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 SGPL1O95470 568 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 KCNJ2P63252 427 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 C1orf220Q5T0J3 134 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 MAB21L3Q8N8X9 362 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 DYDC1Q8WWB3 177 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 PSPC1Q8WXF1 523 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 ZDHHC15Q96MV8 337 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 NUP85Q9BW27 656 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 SCN9AQ15858 1988 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 FSCN2O14926 492 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 PMM2O15305 246 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 ATMINO43313 823 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 SPOPO43791 374 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 HIP1RO75146 1068 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 BMP3P12645 472 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 SCP2P22307 547 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 CLNS1AP54105 237 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 RWDD2BP57060 319 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 LRRC14Q15048 493 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 CKAP2Q8WWK9 683 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 UVRAGQ9P2Y5 699 aa16.34■□□□□ 0.21
CDC42EP4-202ENST00000439510 GAS7O60861 476 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 TCEA3O75764 348 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 CRKP46108 304 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 COPS2P61201 443 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 RSRC1Q96IZ7 334 aaKnown RBP16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 PRKAG3Q9UGI9 489 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 GTF3C4Q9UKN8 822 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 C15orf41Q9Y2V0 281 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 ARL2BPQ9Y2Y0 163 aa16.33■□□□□ 0.21
CDC42EP4-202ENST00000439510 ACSL3O95573 720 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 CREB1P16220 341 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 ITIH2P19823 946 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 GBP2P32456 591 aaPredicted RBP16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 PTGER2P43116 358 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 ALDH5A1P51649 535 aaPredicted RBP16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 SH3BP5LQ7L8J4 393 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 AGAP11Q8TF27 550 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
CDC42EP4-202ENST00000439510 GCLMP48507 274 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 FMO1Q01740 532 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 KRT17Q04695 432 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 OTUD6AQ7L8S5 288 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 NSMCE1Q8WV22 266 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 KAT5Q92993 513 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 BTBD6Q96KE9 485 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 TMEM206Q9H813 350 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 ARHGEF3Q9NR81 526 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 BCS1LQ9Y276 419 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 MAPK13O15264 365 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 ANP32DO95626 131 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 TTC4O95801 387 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 MAPTP10636 758 aaKnown RBP16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 IVDP26440 423 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 TCP10Q12799 353 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 MYO1EQ12965 1108 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 ALCAMQ13740 583 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 RASA3Q14644 834 aa16.32■□□□□ 0.2
CDC42EP4-202ENST00000439510 NUGGCQ68CJ6 796 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms