RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 MIER3Q7Z3K6 550 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 CROCCP2Q86T23 111 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 SULF1Q8IWU6 871 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 FAM71AQ8IYT1 594 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 XXYLT1Q8NBI6 393 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 ATXN2LQ8WWM7 1075 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 KAT5Q92993 513 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 ZNF317Q96PQ6 595 aaPredicted RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 PICK1Q9NRD5 415 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 HSPBP1Q9NZL4 362 aa17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 MTRF1LQ9UGC7 380 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 DBR1Q9UK59 544 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-203ENST00000439316 GOLGA6L7A0A1B0GV03 622 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 DDX39AO00148 427 aaKnown RBP17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SGPL1O95470 568 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 P4HBP07237 508 aaKnown RBP17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 PLS3P13797 630 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 MNAT1P51948 309 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 ADCY2Q08462 1091 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SPP2Q13103 211 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 MTMR2Q13614 643 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 MESDQ14696 234 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 CCDC137Q6PK04 289 aaKnown RBP17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 FAM160B2Q86V87 743 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 RUNDC3BQ96NL0 473 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 TMEM117Q9H0C3 514 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 AZI2Q9H6S1 392 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SLC40A1Q9NP59 571 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 DNM1LO00429 736 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 AGTP01019 485 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 CYP1A2P05177 515 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 PYGMP11217 842 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 CHN1P15882 459 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 PTPRAP18433 802 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 EPHX2P34913 555 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 MXI1P50539 228 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 HSD17B4P51659 736 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SIX1Q15475 284 aaPredicted RBP17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 MAEAQ7L5Y9 396 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 CPLX4Q7Z7G2 160 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 LDHDQ86WU2 507 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 SLC13A5Q86YT5 568 aaPredicted RBP17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 KREMEN1Q96MU8 473 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 YY1AP1Q9H869 796 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 FEM1BQ9UK73 627 aa17.6■□□□□ 0.41
CLCNKA-203ENST00000439316 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 MMEP08473 750 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 COILP38432 576 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 RARRES1P49788 294 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 GTF2BQ00403 316 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 C6orf118Q5T5N4 469 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 UBAP2Q5T6F2 1119 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 C12orf50Q8NA57 414 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ZSWIM2Q8NEG5 633 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 SHC3Q92529 594 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 LPAR1Q92633 364 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ART4Q93070 314 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 SEMA4AQ9H3S1 761 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 A1CFQ9NQ94 594 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 KLC4Q9NSK0 619 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 TCRBV7S2A1N4TA0A589 114 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 RGS16O15492 202 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 DHX15O43143 795 aaKnown RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ATMINO43313 823 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 GHRP10912 638 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 FMO1Q01740 532 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 SLMAPQ14BN4 828 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 TNFAIP8L3Q5GJ75 292 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 CYFIP1Q7L576 1253 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 NIPA1Q7RTP0 329 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 TAX1BP1Q86VP1 789 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ZNF564Q8TBZ8 553 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 CCT6BQ92526 530 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 SELENOSQ9BQE4 189 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 CHORDC1Q9UHD1 332 aaPredicted RBP17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 PHIPQ8WWQ0 1821 aa17.59■□□□□ 0.41
CLCNKA-203ENST00000439316 ANKRD63C9JTQ0 380 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 RIPK2O43353 540 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 LYPLA2O95372 231 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 ADRB2P07550 413 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 RARGP13631 454 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 USP50Q70EL3 339 aaPredicted RBP17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 ZNF280CQ8ND82 737 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 NUP85Q9BW27 656 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 KDM4CQ9H3R0 1056 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 CCDC134Q9H6E4 229 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 KCNH7Q9NS40 1196 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
CLCNKA-203ENST00000439316 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms