RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LILRA6Q6PI73 481 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 ZNF572Q7Z3I7 529 aaPredicted RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 GSPT2Q8IYD1 628 aaKnown RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 D2HGDHQ8N465 521 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 LILRA3Q8N6C8 439 aaPredicted RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 OR2I1PQ8NGU4 316 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 CXorf38Q8TB03 319 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 SLC35G2Q8TBE7 412 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 MDM1Q8TC05 714 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 MVB12AQ96EY5 273 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM89AQ96GI7 184 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 C8orf48Q96LL4 319 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 ZNF512Q96ME7 567 aaPredicted RBP4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 SAMD11Q96NU1 681 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 PCDHA13Q9Y5I0 950 aa4.88□□□□□ -1.63
LSM1P1-201ENST00000438629 PATE3B3GLJ2 98 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 CYP27B1O15528 508 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 GPR42O15529 346 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 PJA2O43164 708 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 ZNF623O75123 536 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 GPR32O75388 356 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 DDCP20711 480 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 GUCY1A2P33402 732 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 IL12RB1P42701 662 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 SLC6A9P48067 706 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 CTSWP56202 376 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 PLP2Q04941 152 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 IL10RAQ13651 578 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 HLTFQ14527 1009 aaKnown RBP eCLIP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 C3orf36Q3SXR2 165 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 PRAMEF14Q5SWL7 426 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 GADL1Q6ZQY3 521 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 DOK3Q7L591 496 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 EPM2AIP1Q7L775 607 aaPredicted RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 TRMT2AQ8IZ69 625 aaKnown RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 FUKQ8N0W3 1084 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 C3orf20Q8ND61 904 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 CCHCR1Q8TD31 782 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 TSR2Q969E8 191 aaKnown RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 TMEM176AQ96HP8 235 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 RBM15Q96T37 977 aaKnown RBP eCLIP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 SSBP3Q9BWW4 388 aaPredicted RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 GTPBP4Q9BZE4 634 aaKnown RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 C1orf112Q9NSG2 853 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 SIK3Q9Y2K2 1263 aa4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 MYBBP1AQ9BQG0 1328 aaKnown RBP4.87□□□□□ -1.63
LSM1P1-201ENST00000438629 A0A0G2JLL6 359 aaPredicted RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 PRR5-ARHGAP8B1AHC4 643 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 FOXS1O43638 330 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 CTNND1O60716 968 aaKnown RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 ALOX15P16050 662 aaPredicted RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 ATF3P18847 181 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 COMTP21964 271 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 MSX2P35548 267 aaPredicted RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 CTXN1P60606 82 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 FOXL1Q12952 345 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 OTUD7BQ6GQQ9 843 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 CATIPQ7Z7H3 387 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 SGMS1Q86VZ5 419 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 GRAMD1CQ8IYS0 662 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 TTC9BQ8N6N2 239 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 CHST13Q8NET6 341 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 DNERQ8NFT8 737 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 TTC8Q8TAM2 541 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 NSUN6Q8TEA1 469 aaKnown RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 ST8SIA2Q92186 375 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 TMX3Q96JJ7 454 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM167AQ96KS9 214 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 LRGUKQ96M69 825 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 CPPED1Q9BRF8 314 aaPredicted RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 SLC12A5Q9H2X9 1139 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 PRDM11Q9NQV5 511 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 AJAP1Q9UKB5 411 aaPredicted RBP4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 PCDHB1Q9Y5F3 818 aa4.86□□□□□ -1.63
LSM1P1-201ENST00000438629 TBKBP1A7MCY6 615 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 H3BML4 177 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 K7ESM1 405 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 MGAT1P26572 445 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 DSC2Q02487 901 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 CREMQ03060 361 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 ARHGAP29Q52LW3 1261 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 CCDC157Q569K6 752 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 CAMKK1Q8N5S9 505 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 REPS2Q8NFH8 660 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 ZFP28Q8NHY6 868 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 DIS3LQ8TF46 1054 aaKnown RBP4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 KAT5Q92993 513 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 RGMAQ96B86 450 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 CDK5RAP3Q96JB5 506 aa4.85□□□□□ -1.63
LSM1P1-201ENST00000438629 FAM193BQ96PV7 902 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms