RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CEP95Q96GE4 821 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 PHACTR3Q96KR7 559 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 MTFR1LQ9H019 292 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 SPTLC3Q9NUV7 552 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 GPRC5DQ9NZD1 345 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 TESQ9UGI8 421 aaKnown RBP4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 ATP11BQ9Y2G3 1177 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 CD2APQ9Y5K6 639 aa4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 POLR2AP24928 1970 aaKnown RBP4.73□□□□□ -1.65
HMGB1P31-201ENST00000437242 INO80B-WBP1J3KQ70 363 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 GASTP01350 101 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 CFIP05156 583 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 FDXRP22570 491 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 LSSP48449 732 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 FLT3LGP49771 235 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 SCNN1BP51168 640 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 CHN2P52757 468 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 TRIM25Q14258 630 aaKnown RBP4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 C21orf62-AS1Q17RA5 79 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 PRAMEF14Q5SWL7 426 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 GLCCI1Q86VQ1 547 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 PAWRQ96IZ0 340 aaKnown RBP4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 NEU1Q99519 415 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 LRFN3Q9BTN0 628 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 DUSP26Q9BV47 211 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 INO80BQ9C086 356 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 ZSWIM4Q9H7M6 989 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 KIAA1586Q9HCI6 787 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 TMPRSS11EQ9UL52 423 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 CDY2AQ9Y6F7 541 aa4.72□□□□□ -1.65
HMGB1P31-201ENST00000437242 FAM83GA6ND36 823 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 CANXP27824 592 aaKnown RBP4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 CRHR1P34998 444 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 MPLP40238 635 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 KRTAP10-11P60412 298 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 MFSD14BQ5SR56 506 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 ATXN7L2Q5T6C5 722 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 SP5Q6BEB4 398 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 HDGFL2Q7Z4V5 671 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 LYSMD2Q8IV50 215 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 PPM1KQ8N3J5 372 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 OR56A1Q8NGH5 318 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 OR2W6PQ8NHA6 318 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 NOX1Q9Y5S8 564 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 MAST3O60307 1309 aa4.71□□□□□ -1.66
HMGB1P31-201ENST00000437242 PJA2O43164 708 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 CTSSP25774 331 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 PCBP1Q15365 356 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 PITRM1Q5JRX3 1037 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 AGAP9Q5VTM2 703 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 METRNLQ641Q3 311 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 HOMER1Q86YM7 354 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 SLC41A1Q8IVJ1 513 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 MAPKAPK5Q8IW41 473 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 RHOT2Q8IXI1 618 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 FAM98AQ8NCA5 519 aaKnown RBP4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 KCTD10Q9H3F6 313 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 PRDM12Q9H4Q4 367 aa4.7□□□□□ -1.66
HMGB1P31-201ENST00000437242 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 DRGXA6NNA5 263 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 ADCY6O43306 1168 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 FKBP9O95302 570 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 LPLP06858 475 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 SNRPA1P09661 255 aaKnown RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 PTPN7P35236 360 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 ADCYAP1R1P41586 468 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 LGALS4P56470 323 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 CLRN1P58418 232 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 RAP2BP61225 183 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 SEPT7Q16181 437 aaKnown RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 FKBP9P1Q75LS8 142 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 SLC35B2Q8TB61 432 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 SREK1Q8WXA9 508 aaKnown RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 NINJ1Q92982 152 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 RNF31Q96EP0 1072 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 Q96MF0 132 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 ALOXE3Q9BYJ1 711 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 REXO4Q9GZR2 422 aaKnown RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 KLHL11Q9NVR0 708 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 FRMD4BQ9Y2L6 1034 aa4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 NOC2LQ9Y3T9 749 aaKnown RBP4.69□□□□□ -1.66
HMGB1P31-201ENST00000437242 CXorf49A8MYA2 514 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 PHF2O75151 1096 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 IGLV2-14P01704 120 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 ERBB2P04626 1255 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 SCAPQ12770 1279 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 MST1LQ2TV78 715 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 FAM47AQ5JRC9 791 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 EPHA10Q5JZY3 1008 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 BROXQ5VW32 411 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 TSHZ3Q63HK5 1081 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 GPR149Q86SP6 731 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 DRC7Q8IY82 874 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 NIM1KQ8IY84 436 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 SLC5A5Q92911 643 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 TARS2Q9BW92 718 aaKnown RBP4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 EMC7Q9NPA0 242 aa4.68□□□□□ -1.66
HMGB1P31-201ENST00000437242 RPTORQ8N122 1335 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms