RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ATP8B4Q8TF62 1192 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 SEMA4DQ92854 862 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 KCNN1Q92952 543 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 KAT5Q92993 513 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 CD101Q93033 1021 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 MAGOHBQ96A72 148 aaKnown RBP11.2□□□□□ -0.62
CD44-210ENST00000434472 CCDC127Q96BQ5 260 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 SAAL1Q96ER3 474 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 TRIM51Q9BSJ1 452 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 NUP85Q9BW27 656 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 TXLNGYQ9BZA5 131 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ATP6V0A4Q9HBG4 840 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 TMOD4Q9NZQ9 345 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 ZNF112Q9UJU3 913 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 GGA2Q9UJY4 613 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
CD44-210ENST00000434472 TMEM150BA6NC51 233 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 MYO1FO00160 1098 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 STBD1O95210 358 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 MMEP08473 750 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 KCNA2P16389 499 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 FNTAP49354 379 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 CLEC16AQ2KHT3 1053 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 DALRD3Q5D0E6 543 aaKnown RBP11.19□□□□□ -0.62
CD44-210ENST00000434472 XKR3Q5GH77 459 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 CYFIP1Q7L576 1253 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 SLC13A5Q86YT5 568 aaPredicted RBP11.19□□□□□ -0.62
CD44-210ENST00000434472 ZNF280CQ8ND82 737 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 REPS2Q8NFH8 660 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 BICD1Q96G01 975 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 CENPHQ9H3R5 247 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
CD44-210ENST00000434472 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
CD44-210ENST00000434472 PDLIM7Q9NR12 457 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 C1orf112Q9NSG2 853 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 SLC9A2Q9UBY0 812 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 ADAMTS5Q9UNA0 930 aa11.19□□□□□ -0.62
CD44-210ENST00000434472 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 EXTL3O43909 919 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 KIAA0754O94854 1291 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 NUDT17P0C025 328 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 MAN1A1P33908 653 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 FLT3P36888 993 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 COILP38432 576 aaPredicted RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 SLC1A1P43005 524 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 PMS2P54278 862 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 STRN3Q13033 797 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 KRT71Q3SY84 523 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 TTC19Q6DKK2 380 aaPredicted RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 SWSAP1Q6NVH7 229 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 SLC47A2Q86VL8 602 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 PRELID2Q8N945 189 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 TAS1R2Q8TE23 839 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 KRT35Q92764 455 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 SH2D3AQ9BRG2 576 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 ERVK-5Q9HDB9 667 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 JPH1Q9HDC5 661 aaPredicted RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
CD44-210ENST00000434472 HACL1Q9UJ83 578 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 FAM169AQ9Y6X4 670 aa11.18□□□□□ -0.62
CD44-210ENST00000434472 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 HNRNPDLO14979 420 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 ZNF862O60290 1169 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 KRT5P13647 590 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 LIG4P49917 911 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 GUCY1A3Q02108 690 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 PSMD6Q15008 389 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 DENND2CQ68D51 928 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SLFN12LQ6IEE8 588 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SLC39A4Q6P5W5 647 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 CCDC137Q6PK04 289 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 ABHD15Q6UXT9 468 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 TRIM72Q6ZMU5 477 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 C15orf39Q6ZRI6 1047 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 ARMC9Q7Z3E5 817 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 ADAT2Q7Z6V5 191 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 NLRP14Q86W24 1093 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
CD44-210ENST00000434472 ZNF473Q8WTR7 871 aaKnown RBP11.17□□□□□ -0.62
CD44-210ENST00000434472 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms