RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 EEF1DP3Q658K8 133 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 C15orf39Q6ZRI6 1047 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 SPATA31D4Q6ZUB0 917 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 HASPINQ8TF76 798 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 KIAA1024Q9UPX6 916 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
RPUSD3-206ENST00000433535 WDFY4Q6ZS81 3184 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 RFPL2O75678 378 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 RPL17P18621 184 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 MUTP22033 750 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 PTGDRQ13258 359 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 TUSC3Q13454 348 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 HSP90AA2PQ14568 343 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 PPP2R5AQ15172 486 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 PLCD3Q8N3E9 789 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 SNX29Q8TEQ0 813 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 RIN2Q8WYP3 895 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 PHOX2BQ99453 314 aa24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 DDX19AQ9NUU7 478 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-206ENST00000433535 PP2D1A8MPX8 630 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 ACKR2O00590 384 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 KIF4AO95239 1232 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 TCF15Q12870 199 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 USP41Q3LFD5 358 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 PRSS55Q6UWB4 352 aaPredicted RBP24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 OTOP3Q7RTS5 596 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 PALB2Q86YC2 1186 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 CMASQ8NFW8 434 aaPredicted RBP24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 ACSF2Q96CM8 615 aaPredicted RBP24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 ADPGKQ9BRR6 497 aa24.06■■□□□ 1.44
RPUSD3-206ENST00000433535 CCDC195A0A1B0GUA6 201 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 TADA2AO75478 443 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 AVPR2P30518 371 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 PTPN5P54829 565 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 RTP2Q5QGT7 225 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 IGSF22Q8N9C0 903 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 IFT74Q96LB3 600 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 GDAQ9Y2T3 454 aa24.05■■□□□ 1.44
RPUSD3-206ENST00000433535 SF3B1O75533 1304 aaKnown RBP eCLIP24.05■■□□□ 1.441e-6■■■■■ 66.8
RPUSD3-206ENST00000433535 TGM5O43548 720 aa24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 N4BP1O75113 896 aaKnown RBP24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 ELMSAN1Q6PJG2 1045 aa24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 KIFAP3Q92845 792 aa24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 CLUHO75153 1309 aa24.04■■□□□ 1.44
RPUSD3-206ENST00000433535 E9PMD0 336 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 THP07101 528 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 CDC25AP30304 524 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 NAB2Q15742 525 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 IL17AQ16552 155 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 GLRA4Q5JXX5 417 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 NT5DC1Q5TFE4 455 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 ATF7IP2Q5U623 682 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 SMG7Q92540 1137 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 ZNF707Q96C28 371 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 PRRX2Q99811 253 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 RAB34Q9BZG1 259 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 FNIP2Q9P278 1114 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 DPP7Q9UHL4 492 aa24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 MTCL1Q9Y4B5 1905 aaKnown RBP24.03■■□□□ 1.44
RPUSD3-206ENST00000433535 EFNA5P52803 228 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 PDIA5Q14554 519 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 DCAF4L1Q3SXM0 396 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 CEP57Q86XR8 500 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 RUSC1Q9BVN2 902 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 WDR6Q9NNW5 1121 aaKnown RBP24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 VWA8A3KMH1 1905 aa24.02■■□□□ 1.44
RPUSD3-206ENST00000433535 RABEP1Q15276 862 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 FAM171A1Q5VUB5 890 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 MCTP1Q6DN14 999 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 KCNK18Q7Z418 384 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 GPR65Q8IYL9 337 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 KCNK12Q9HB15 430 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 FAM86C1Q9NVL1 165 aa24.01■■□□□ 1.43
RPUSD3-206ENST00000433535 CCDC169A6NNP5 214 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 HIP1RO75146 1068 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 GBP2P32456 591 aaPredicted RBP24■■□□□ 1.43
RPUSD3-206ENST00000433535 NPTX2P47972 431 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 PEX3P56589 373 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 CREMQ03060 361 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 KRT79Q5XKE5 535 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 LILRA6Q6PI73 481 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 DAW1Q8N136 415 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 TMEM105Q8N8V8 129 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 HDAC7Q8WUI4 952 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 TTPALQ9BTX7 342 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 MMTAG2Q9BU76 263 aaKnown RBP24■■□□□ 1.43
RPUSD3-206ENST00000433535 RHOBTB2Q9BYZ6 727 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 PLEKHA4Q9H4M7 779 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 PIDD1Q9HB75 910 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 STK24Q9Y6E0 443 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 PHLPP2Q6ZVD8 1323 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 TRIP11Q15643 1979 aa24■■□□□ 1.43
RPUSD3-206ENST00000433535 DOCK8Q8NF50 2099 aa23.99■■□□□ 1.43
RPUSD3-206ENST00000433535 K7ERI5 159 aa23.99■■□□□ 1.43
RPUSD3-206ENST00000433535 LAD1O00515 517 aa23.99■■□□□ 1.43
RPUSD3-206ENST00000433535 CD2BP2O95400 341 aaKnown RBP23.99■■□□□ 1.43
RPUSD3-206ENST00000433535 IGFBP6P24592 240 aaPredicted RBP23.99■■□□□ 1.43
RPUSD3-206ENST00000433535 PRPHP41219 470 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms