RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FNBP1Q96RU3 617 aa21.12■□□□□ 0.97
VRK2-205ENST00000432057 PARK7Q99497 189 aaKnown RBP21.12■□□□□ 0.97
VRK2-205ENST00000432057 PI4K2AQ9BTU6 479 aa21.12■□□□□ 0.97
VRK2-205ENST00000432057 GOLPH3Q9H4A6 298 aa21.12■□□□□ 0.97
VRK2-205ENST00000432057 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.12■□□□□ 0.97
VRK2-205ENST00000432057 SMARCAL1Q9NZC9 954 aa21.12■□□□□ 0.97
VRK2-205ENST00000432057 DOCK3Q8IZD9 2030 aa21.12■□□□□ 0.97
VRK2-205ENST00000432057 A0A0A6YYK5 440 aaPredicted RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 CLDN10P78369 228 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 IFI16Q16666 785 aaKnown RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 SEZ6Q53EL9 994 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 RNF149Q8NC42 400 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 TPCN2Q8NHX9 752 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 TATDN2Q93075 761 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 KATNBL1Q9H079 304 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 SUCLA2Q9P2R7 463 aaPredicted RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 KAT6AQ92794 2004 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 SPDYE4A6NLX3 237 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 STRNO43815 780 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 HBP1O60381 514 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 MSCO60682 206 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 GH1P01241 217 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 LGALS2P05162 132 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 GJB1P08034 283 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 TNNI1P19237 187 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 ABCB4P21439 1286 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 ADCYAP1R1P41586 468 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 EFNA5P52803 228 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 PRPF4BQ13523 1007 aaKnown RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 LAMC2Q13753 1193 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 MXD4Q14582 209 aaPredicted RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 CC2D1AQ6P1N0 951 aaPredicted RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 NOP9Q86U38 636 aaKnown RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 RHPN2Q8IUC4 686 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 ZBTB8OSQ8IWT0 167 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 EXOC8Q8IYI6 725 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 RPUSD2Q8IZ73 545 aaKnown RBP21.11■□□□□ 0.97
VRK2-205ENST00000432057 LRRC57Q8N9N7 239 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 EPS8L1Q8TE68 723 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 RNPEPQ9H4A4 650 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 ACP6Q9NPH0 428 aa21.11■□□□□ 0.97
VRK2-205ENST00000432057 RBM47A0AV96 593 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 CYP26A1O43174 497 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 ZRANB2O95218 330 aaKnown RBP eCLIP21.1■□□□□ 0.97
VRK2-205ENST00000432057 LDHAP00338 332 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 PRKCBP05771 671 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 TMEM253P0C7T8 217 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 CLCN3P51790 818 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 GRB14Q14449 540 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 TAF3Q5VWG9 929 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 TDRD10Q5VZ19 366 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 ZPBP2Q6X784 338 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 ZNF572Q7Z3I7 529 aaPredicted RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 ZNF467Q7Z7K2 595 aaPredicted RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 ZNF668Q96K58 619 aaPredicted RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 MRPL4Q9BYD3 311 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 ERAP1Q9NZ08 941 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 NOCTQ9UK39 431 aaKnown RBP21.1■□□□□ 0.97
VRK2-205ENST00000432057 RAB21Q9UL25 225 aa21.1■□□□□ 0.97
VRK2-205ENST00000432057 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.09■□□□□ 0.97
VRK2-205ENST00000432057 DCAF8L1A6NGE4 600 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 SNAI1O95863 264 aaPredicted RBP21.09■□□□□ 0.97
VRK2-205ENST00000432057 ZACNQ401N2 412 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 CCDC181Q5TID7 509 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 ZBTB33Q86T24 672 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 DPP9Q86TI2 863 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 SLC47A2Q86VL8 602 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 ARHGEF26Q96DR7 871 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 JPH2Q9BR39 696 aaPredicted RBP21.09■□□□□ 0.97
VRK2-205ENST00000432057 HLA-DRAP01903 254 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 C4BPAP04003 597 aaKnown RBP21.09■□□□□ 0.97
VRK2-205ENST00000432057 CHRNB2P17787 502 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 PIK3CAP42336 1068 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 IGBP1P78318 339 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 BRD3Q15059 726 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 PTPROQ16827 1216 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 FAM110CQ1W6H9 321 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 EFCAB12Q6NXP0 572 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 AFG1LQ8WV93 481 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 CTNNBL1Q8WYA6 563 aaPredicted RBP21.09■□□□□ 0.97
VRK2-205ENST00000432057 MS4A14Q96JA4 679 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 NLRP4Q96MN2 994 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 CGRRF1Q99675 332 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 C1orf112Q9NSG2 853 aa21.09■□□□□ 0.97
VRK2-205ENST00000432057 CNTNAP2Q9UHC6 1331 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 CCDC151A5D8V7 595 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 CLDN3O15551 220 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 VNN1O95497 513 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 C22orf31O95567 290 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 ZNF286BP0CG31 522 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 TNFSF9P41273 254 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 VSNL1P62760 191 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 BIRC3Q13489 604 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 METTL13Q8N6R0 699 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 RFFLQ8WZ73 363 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 MAML3Q96JK9 1138 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 ACO2Q99798 780 aaKnown RBP21.08■□□□□ 0.97
VRK2-205ENST00000432057 THAP2Q9H0W7 228 aa21.08■□□□□ 0.97
VRK2-205ENST00000432057 C2orf40Q9H1Z8 148 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms