RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 UTP6Q9NYH9 597 aaKnown RBP6.54□□□□□ -1.36
CHD8-202ENST00000430710 RGL1Q9NZL6 768 aa6.54□□□□□ -1.36
CHD8-202ENST00000430710 ADGRA3Q8IWK6 1321 aa6.54□□□□□ -1.36
CHD8-202ENST00000430710 FSBPO95073 299 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 DPYDQ12882 1025 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 FAM117BQ6P1L5 589 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TTLL6Q8N841 843 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SKA2Q8WVK7 121 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 MAGEB18Q96M61 343 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PIGSQ96S52 555 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TEX12Q9BXU0 123 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RXFP1Q9HBX9 757 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 LRFN2Q9ULH4 789 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TBXAS1P24557 533 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 TARSP26639 723 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 STX3Q13277 289 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ZBTB41Q5SVQ8 909 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 MYLK4Q86YV6 388 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 CCSER1Q9C0I3 900 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ADNPQ9H2P0 1102 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 FNDC3AQ9Y2H6 1198 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 COPG1Q9Y678 874 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 USP42Q9H9J4 1324 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SYNJ2BP-COX16A0A087WUM0 186 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SRRM3A6NNA2 597 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SPAG6O75602 509 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CDH2P19022 906 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 CHRNA5P30532 468 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ROR1Q01973 937 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ANKRD40Q6AI12 368 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TRAF7Q6Q0C0 670 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SGMS1Q86VZ5 419 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CATSPER3Q86XQ3 398 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 XXYLT1Q8NBI6 393 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RBBP8NLQ8NC74 664 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 OR2W6PQ8NHA6 318 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 C1orf54Q8WWF1 131 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SLC7A3Q8WY07 619 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SYN2Q92777 582 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 FAM149B1Q96BN6 582 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 STRBPQ96SI9 672 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SIKE1Q9BRV8 207 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SYBUQ9NX95 663 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 COX16Q9P0S2 106 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SCAF8Q9UPN6 1271 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 LRCH1Q9Y2L9 728 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ZNF839A8K0R7 811 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 H3BQF6 201 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 M0R3G1 203 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SEC24DO94855 1032 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 TYK2P29597 1187 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 USP11P51784 963 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ABCE1P61221 599 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 BTNL9Q6UXG8 535 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 BARGINQ6ZT62 677 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TMC4Q7Z404 712 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PRPF39Q86UA1 669 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SIX6OS1Q8N1H7 587 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ZNF483Q8TF39 744 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SNRNP27Q8WVK2 155 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 PRPF18Q99633 342 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 PABPC3Q9H361 631 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 AGPAT5Q9NUQ2 364 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RAB21Q9UL25 225 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 AURKCQ9UQB9 309 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 C15orf41Q9Y2V0 281 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PDS5AQ29RF7 1337 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 MAP2P11137 1827 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 KDM4FA0A1W2PPD8 638 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 FOXN1O15353 648 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 SERPINB9P50453 376 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 ARL13BQ3SXY8 428 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PPP1R18Q6NYC8 613 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CYB5R4Q7L1T6 521 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 GPR141Q7Z602 305 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PRUNE1Q86TP1 453 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RHPN2Q8IUC4 686 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CNBD2Q96M20 576 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RBM15Q96T37 977 aaKnown RBP eCLIP6.53□□□□□ -1.365e-7■■■■□ 25.4
CHD8-202ENST00000430710 NPHP4O75161 1426 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 PI4K2BG5E9Z4 385 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 RPS6KA5O75582 802 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PAX7P23759 505 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 PPARGP37231 505 aaPredicted RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 VAMP7P51809 220 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 NUP107P57740 925 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TFAMQ00059 246 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 AP3B2Q13367 1082 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 CAPRIN1Q14444 709 aaKnown RBP6.53□□□□□ -1.36
CHD8-202ENST00000430710 SLC29A2Q14542 456 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 TXNRD1Q16881 649 aa6.53□□□□□ -1.36
CHD8-202ENST00000430710 MDH1BQ5I0G3 518 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms