RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SCFD1Q8WVM8 642 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 STRA6Q9BX79 667 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 HAPLN2Q9GZV7 340 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 PRDM12Q9H4Q4 367 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 AAASQ9NRG9 546 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 KANSL3Q9P2N6 904 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 AGO2Q9UKV8 859 aaKnown RBP15.9■□□□□ 0.14
SGCE-204ENST00000428696 TTC3P53804 2025 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 A0A0B4J269 797 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 GOLGA8IPA6NC78 632 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 GOLGA8JA6NMD2 632 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 EIF3DO15371 548 aaKnown RBP eCLIP15.89■□□□□ 0.13
SGCE-204ENST00000428696 ZC3H11AO75152 810 aaKnown RBP eCLIP15.89■□□□□ 0.13
SGCE-204ENST00000428696 PIGRP01833 764 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 PROZP22891 400 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 PBX3P40426 434 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 GRM5P41594 1212 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 GLRA4Q5JXX5 417 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 SLC39A4Q6P5W5 647 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 SMYD4Q8IYR2 804 aaPredicted RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 FBXO22Q8NEZ5 403 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 SAAL1Q96ER3 474 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 FAM213AQ9BRX8 229 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 MRPL9Q9BYD2 267 aaKnown RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 TTYH1Q9H313 450 aaPredicted RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 RPF1Q9H9Y2 349 aaKnown RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 TOPORSQ9NS56 1045 aaPredicted RBP15.89■□□□□ 0.13
SGCE-204ENST00000428696 TBC1D13Q9NVG8 400 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 MIOSQ9NXC5 875 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 PCDHB12Q9Y5F1 795 aa15.89■□□□□ 0.13
SGCE-204ENST00000428696 NT5C1B-RDH14C9J2C7 533 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 CLIC2O15247 247 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 OGTO15294 1046 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 RHOBTB3O94955 611 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 CLTAP09496 248 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 IGFBP4P22692 258 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 HOXD13P35453 343 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 BMPR1AP36894 532 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 TNFSF9P41273 254 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 OR1G1P47890 313 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 ALDH7A1P49419 539 aaKnown RBP15.88■□□□□ 0.13
SGCE-204ENST00000428696 CYP2J2P51589 502 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 SPAG1Q07617 926 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 EHHADHQ08426 723 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 GRIN2CQ14957 1233 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 KNOP1Q1ED39 458 aaKnown RBP15.88■□□□□ 0.13
SGCE-204ENST00000428696 EPC2Q52LR7 807 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 ZBTB41Q5SVQ8 909 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
SGCE-204ENST00000428696 HS2ST1Q7LGA3 356 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 ZNF280BQ86YH2 543 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 GSDMAQ96QA5 445 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 CXCL16Q9H2A7 254 aa15.88■□□□□ 0.13
SGCE-204ENST00000428696 ABLIM1O14639 778 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 KIF20AO95235 890 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 ALDH2P05091 517 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 CXCL8P10145 99 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 MCM4P33991 863 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 BCAR1P56945 870 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 KCNB1Q14721 858 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 RDH13Q8NBN7 331 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 RABGGTAQ92696 567 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 ZNF558Q96NG5 402 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 CBWD1Q9BRT8 395 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 NUP62CLQ9H1M0 184 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 DNAJB4Q9UDY4 337 aa15.87■□□□□ 0.13
SGCE-204ENST00000428696 DDHD2O94830 711 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 THP07101 528 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 LAG3P18627 525 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 ADSSP30520 456 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 ERVK-21P61565 698 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 GPM6BQ13491 265 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 KYAT1Q16773 422 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 KCNT2Q6UVM3 1135 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 GPT2Q8TD30 523 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 KCNN1Q92952 543 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 SAMD11Q96NU1 681 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 CWH43Q9H720 699 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 NRDE2Q9H7Z3 1164 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
SGCE-204ENST00000428696 ALG13Q9NP73 1137 aaKnown RBP15.86■□□□□ 0.13
SGCE-204ENST00000428696 AGPAT3Q9NRZ7 376 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 MAN1B1Q9UKM7 699 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 FAN1Q9Y2M0 1017 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 RWDD3Q9Y3V2 267 aa15.86■□□□□ 0.13
SGCE-204ENST00000428696 GARTP22102 1010 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 CA8P35219 290 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 PPP2R3AQ06190 1150 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 SLC10A6Q3KNW5 377 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 ZNF658Q5TYW1 1059 aaPredicted RBP15.85■□□□□ 0.13
SGCE-204ENST00000428696 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
SGCE-204ENST00000428696 KLHL23Q8NBE8 558 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 GDPD5Q8WTR4 605 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 CLSTN2Q9H4D0 955 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 CACNG4Q9UBN1 327 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
SGCE-204ENST00000428696 PRG3Q9Y2Y8 225 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms