RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PRSS55Q6UWB4 352 aaPredicted RBP17.15■□□□□ 0.34
SEC13-210ENST00000428626 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 HACE1Q8IYU2 909 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
SEC13-210ENST00000428626 BHMT2Q9H2M3 363 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 FAM86C1Q9NVL1 165 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
SEC13-210ENST00000428626 MYO15AQ9UKN7 3530 aa17.14■□□□□ 0.34
SEC13-210ENST00000428626 CCDC195A0A1B0GUA6 201 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 ACKR2O00590 384 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 TGM5O43548 720 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 KIF4AO95239 1232 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 PAPLNO95428 1278 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 CCT6AP40227 531 aaKnown RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 NAMPTP43490 491 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 PTPN5P54829 565 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 TUSC3Q13454 348 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 PRPF4BQ13523 1007 aaKnown RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 NT5DC1Q5TFE4 455 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 IGSF22Q8N9C0 903 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 ERMNQ8TAM6 284 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 RIN2Q8WYP3 895 aaPredicted RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 C2orf40Q9H1Z8 148 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.33
SEC13-210ENST00000428626 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
SEC13-210ENST00000428626 ZFHX2Q9C0A1 2572 aaPredicted RBP17.13■□□□□ 0.33
SEC13-210ENST00000428626 N4BP3O15049 544 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 NR1I2O75469 434 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 CDC25AP30304 524 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 TRAPPC10P48553 1259 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 PTGDRQ13258 359 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 MAPK6Q16659 721 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 OTOP3Q7RTS5 596 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 DAW1Q8N136 415 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 DEPTORQ8TB45 409 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 RSAD2Q8WXG1 361 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 MYADMQ96S97 322 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 KCNK12Q9HB15 430 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 WDR6Q9NNW5 1121 aaKnown RBP17.13■□□□□ 0.33
SEC13-210ENST00000428626 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
SEC13-210ENST00000428626 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 DMDP11532 3685 aa17.13■□□□□ 0.33
SEC13-210ENST00000428626 E9PMD0 336 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 ADAM12O43184 909 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 MUTP22033 750 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 HAUS3Q68CZ6 603 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 CD300LGQ6UXG3 332 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 SMG7Q92540 1137 aaKnown RBP17.12■□□□□ 0.33
SEC13-210ENST00000428626 ACSF2Q96CM8 615 aaPredicted RBP17.12■□□□□ 0.33
SEC13-210ENST00000428626 MMTAG2Q9BU76 263 aaKnown RBP17.12■□□□□ 0.33
SEC13-210ENST00000428626 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
SEC13-210ENST00000428626 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 TADA2AO75478 443 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 THP07101 528 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 NPR3P17342 541 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 MAPK7Q13164 816 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 PDIA5Q14554 519 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 GLRA4Q5JXX5 417 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 TAS1R3Q7RTX0 852 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 CEP120Q8N960 986 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 LNX1Q8TBB1 728 aaPredicted RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 PRRX2Q99811 253 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 RUSC1Q9BVN2 902 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
SEC13-210ENST00000428626 CLUHO75153 1309 aa17.11■□□□□ 0.33
SEC13-210ENST00000428626 H0Y858 1186 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 TMEM132AQ24JP5 1023 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 FAM171A1Q5VUB5 890 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 ST13P5Q8NFI4 369 aaPredicted RBP17.1■□□□□ 0.33
SEC13-210ENST00000428626 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 PLEKHA4Q9H4M7 779 aa17.1■□□□□ 0.33
SEC13-210ENST00000428626 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.1■□□□□ 0.33
SEC13-210ENST00000428626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.33
SEC13-210ENST00000428626 SF3B1O75533 1304 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■■■■■ 86.2
SEC13-210ENST00000428626 MEFVO15553 781 aaPredicted RBP17.09■□□□□ 0.33
SEC13-210ENST00000428626 GALR2O43603 387 aaPredicted RBP17.09■□□□□ 0.33
SEC13-210ENST00000428626 PI15O43692 258 aa17.09■□□□□ 0.33
SEC13-210ENST00000428626 C1RP00736 705 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms