RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 TMC2Q8TDI7 906 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 DIS3LQ8TF46 1054 aaKnown RBP13.11□□□□□ -0.31
RFC4-206ENST00000427785 U2AF1L4Q8WU68 220 aaKnown RBP13.11□□□□□ -0.31
RFC4-206ENST00000427785 CPLX3Q8WVH0 158 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 POP1Q99575 1024 aaKnown RBP13.11□□□□□ -0.31
RFC4-206ENST00000427785 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 AGPAT5Q9NUQ2 364 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
RFC4-206ENST00000427785 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.313e-11■□□□□ 10.1
RFC4-206ENST00000427785 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
RFC4-206ENST00000427785 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 MFAP3LO75121 409 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 LDHAP00338 332 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 CXCL8P10145 99 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 ACTN1P12814 892 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 TRIM21P19474 475 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 CASP14P31944 242 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
RFC4-206ENST00000427785 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 GBP6Q6ZN66 633 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 PARD3BQ8TEW8 1205 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 CGRRF1Q99675 332 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 EIF2AQ9BY44 585 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
RFC4-206ENST00000427785 SCN1AP35498 2009 aa13.1□□□□□ -0.31
RFC4-206ENST00000427785 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 TTC26A0AVF1 554 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 RNF225M0QZC1 329 aaPredicted RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 N4BP1O75113 896 aaKnown RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 TPM1P09493 284 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 GHRP10912 638 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 SLC9A1P19634 815 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 EXOC3L4Q17RC7 722 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 ZNF618Q5T7W0 954 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 FAM126BQ8IXS8 530 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
RFC4-206ENST00000427785 GANQ9H2C0 597 aa13.09□□□□□ -0.31
RFC4-206ENST00000427785 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 AKR1B15C9JRZ8 316 aaPredicted RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 STX10O60499 249 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 PQBP1O60828 265 aaKnown RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 RPS6KA5O75582 802 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 SGPL1O95470 568 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 RPLP2P05387 115 aaKnown RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 TNNI1P19237 187 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 PON1P27169 355 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
RFC4-206ENST00000427785 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 GJB7Q6PEY0 223 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 USP37Q86T82 979 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 RPF1Q9H9Y2 349 aaKnown RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.323e-6■■■■■ 108.7
RFC4-206ENST00000427785 AJAP1Q9UKB5 411 aaPredicted RBP13.08□□□□□ -0.32
RFC4-206ENST00000427785 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.32
RFC4-206ENST00000427785 CAND2O75155 1236 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 LRRN2O75325 713 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 NOL4O94818 638 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 NFICP08651 508 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CLTAP09496 248 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CKBP12277 381 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 AXLP30530 894 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CD52P31358 61 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 GRM5P41594 1212 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 PIK3CAP42336 1068 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CDK7P50613 346 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
RFC4-206ENST00000427785 CCZ1BP86790 482 aa13.07□□□□□ -0.32
RFC4-206ENST00000427785 CCZ1P86791 482 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms