RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TRIM43BA6NCK2 446 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 HAS3O00219 553 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 PRKCBP05771 671 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 CCDC175P0C221 793 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 TMOD1P28289 359 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 PCSK9Q8NBP7 692 aaKnown RBP19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 LMO3Q8TAP4 145 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 TRIM43Q96BQ3 446 aaPredicted RBP19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 NLRP4Q96MN2 994 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 MYO6Q9UM54 1294 aa19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 EPN1Q9Y6I3 576 aaPredicted RBP19.48■□□□□ 0.71
AC055811.2-201ENST00000427497 ZNF233A6NK53 670 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 TTLL13PA6NNM8 815 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 NDUFA10O95299 355 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 KIAA0753Q2KHM9 967 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 CRELD2Q6UXH1 353 aaPredicted RBP19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 CCDC170Q8IYT3 715 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 ACO2Q99798 780 aaKnown RBP19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 FAM213AQ9BRX8 229 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 INTS2Q9H0H0 1204 aaKnown RBP19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 IFT122Q9HBG6 1241 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 DAAM1Q9Y4D1 1078 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 FHOD1Q9Y613 1164 aa19.47■□□□□ 0.71
AC055811.2-201ENST00000427497 GOLGA6L9A6NEM1 432 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 LRRIQ3A6PVS8 624 aaPredicted RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 PQBP1O60828 265 aaKnown RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 TOM1L1O75674 476 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 LDHAP00338 332 aaKnown RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ASGR1P07306 291 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 CLTBP09497 229 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 GCLMP48507 274 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 NKX3-2P78367 333 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 MBTD1Q05BQ5 628 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 MFSD10Q14728 455 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 PTPN14Q15678 1187 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 EPC2Q52LR7 807 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 GNASQ5JWF2 1037 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 USP37Q86T82 979 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 LMBR1Q8WVP7 490 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 NHEJ1Q9H9Q4 299 aaPredicted RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 AIPL1Q9NZN9 384 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ARHGAP20Q9P2F6 1191 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 NRCAMQ92823 1304 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ACKR2O00590 384 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ABLIM1O14639 778 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 SMIM10L2AP0DMW4 78 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 SMIM10L2BP0DMW5 78 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 GTF2H1P32780 548 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 PHKA2P46019 1235 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 NLRP11P59045 1033 aaKnown RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 CLDN10P78369 228 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 PSMD6Q15008 389 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 FSCN1Q16658 493 aaKnown RBP19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 FAM187BQ17R55 369 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 SFMBT2Q5VUG0 894 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 HGSNATQ68CP4 663 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 GPR153Q6NV75 609 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ANKRD33Q7Z3H0 272 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 KIAA0319LQ8IZA0 1049 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 EHBP1Q8NDI1 1231 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 BADQ92934 168 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 GLT1D1Q96MS3 346 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 MSTO1Q9BUK6 570 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 TMEM117Q9H0C3 514 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 MINDY3Q9H8M7 445 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 SETD4Q9NVD3 440 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 ANKFY1Q9P2R3 1169 aa19.46■□□□□ 0.71
AC055811.2-201ENST00000427497 MBLAC1A4D2B0 266 aaPredicted RBP19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 FAM189A1O60320 539 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 TNNT1P13805 278 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 PROZP22891 400 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 PSEN2P49810 448 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 MXI1P50539 228 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 JAM2P57087 298 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 BEX3Q00994 111 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 CETN1Q12798 172 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 TSHZ1Q6ZSZ6 1077 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 ACRBPQ8NEB7 543 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 CCDC127Q96BQ5 260 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 ZNF668Q96K58 619 aaPredicted RBP19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 TOX2Q96NM4 488 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 TMEM8AQ9HCN3 771 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 PTPRHQ9HD43 1115 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 AJAP1Q9UKB5 411 aaPredicted RBP19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 COQ4Q9Y3A0 265 aa19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 REXO2Q9Y3B8 237 aaKnown RBP19.45■□□□□ 0.7
AC055811.2-201ENST00000427497 INO80B-WBP1J3KQ70 363 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 KIF2AO00139 706 aaPredicted RBP19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 CLDN3O15551 220 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 VTNP04004 478 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 MYL3P08590 195 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 CYLC1P35663 651 aaPredicted RBP19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 ADAM17P78536 824 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 MCL1Q07820 350 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 IQCEQ6IPM2 695 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms