RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 GGA2Q9UJY4 613 aa19.23■□□□□ 0.67
LIMS2-211ENST00000426981 SIP14410 1827 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 BTNL10A8MVZ5 291 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 EIF3HO15372 352 aaKnown RBP eCLIP19.22■□□□□ 0.67
LIMS2-211ENST00000426981 PHACTR2O75167 634 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 ATG7O95352 703 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 INSRRP14616 1297 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 FOSL2P15408 326 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 IRAK1P51617 712 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 PLCB4Q15147 1175 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 IFI16Q16666 785 aaKnown RBP19.22■□□□□ 0.67
LIMS2-211ENST00000426981 INF2Q27J81 1249 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 PRR16Q569H4 304 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 C8orf74Q6P047 294 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 CNKSR3Q6P9H4 555 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
LIMS2-211ENST00000426981 TADA2BQ86TJ2 420 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 HERC6Q8IVU3 1022 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 SLC17A8Q8NDX2 589 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 WHAMMQ8TF30 809 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 LENG9Q96B70 501 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 TMEM60Q9H2L4 133 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 YY1AP1Q9H869 796 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 LRWD1Q9UFC0 647 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 EMSYQ7Z589 1322 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 NRCAMQ92823 1304 aa19.22■□□□□ 0.67
LIMS2-211ENST00000426981 UNC80Q8N2C7 3258 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 AGPSO00116 658 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 IPO5O00410 1097 aaKnown RBP19.21■□□□□ 0.67
LIMS2-211ENST00000426981 CA3P07451 260 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 GNAT1P11488 350 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 NOP2P46087 812 aaKnown RBP19.21■□□□□ 0.67
LIMS2-211ENST00000426981 ADGRE1Q14246 886 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 PDXDC1Q6P996 788 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 ABHD15Q6UXT9 468 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 SND1Q7KZF4 910 aaKnown RBP eCLIP19.21■□□□□ 0.67
LIMS2-211ENST00000426981 C3orf20Q8ND61 904 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 IPO4Q8TEX9 1081 aaKnown RBP19.21■□□□□ 0.67
LIMS2-211ENST00000426981 CDK5RAP3Q96JB5 506 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 ZNF577Q9BSK1 485 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 CERS4Q9HA82 394 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 SLC28A3Q9HAS3 691 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 CEP72Q9P209 647 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 LCMT1Q9UIC8 334 aa19.21■□□□□ 0.67
LIMS2-211ENST00000426981 MACROD2A1Z1Q3 448 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 LCHNA4D1U4 455 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 RFXAPO00287 272 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 TULP1O00294 542 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-211ENST00000426981 SRGAP2O75044 1071 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 CHRNA1P02708 482 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 CIITAP33076 1130 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 STAT5BP51692 787 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 ICE2Q659A1 982 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 FAM117BQ6P1L5 589 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 CCDC60Q8IWA6 550 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-211ENST00000426981 ARFGAP2Q8N6H7 521 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 MAFAQ8NHW3 353 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-211ENST00000426981 DNAJB3Q8WWF6 145 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 SLC9A7Q96T83 725 aa19.2■□□□□ 0.66
LIMS2-211ENST00000426981 IGKV6D-21A0A0A0MT36 114 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 TRIM66O15016 1216 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 BAIAP3O94812 1187 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 PARNO95453 639 aaKnown RBP19.19■□□□□ 0.66
LIMS2-211ENST00000426981 SERPING1P05155 500 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 ATP4AP20648 1035 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 EIF4A3P38919 411 aaKnown RBP19.19■□□□□ 0.66
LIMS2-211ENST00000426981 C2orf54Q08AI8 447 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 STK4Q13043 487 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 PLEKHG4Q58EX7 1191 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 PPP2R2DQ66LE6 453 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
LIMS2-211ENST00000426981 CACNA2D4Q7Z3S7 1137 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 USP38Q8NB14 1042 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 TBCKQ8TEA7 893 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 AZI2Q9H6S1 392 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-211ENST00000426981 ARHGAP20Q9P2F6 1191 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 TRPC6Q9Y210 931 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 MICAL3Q7RTP6 2002 aa19.19■□□□□ 0.66
LIMS2-211ENST00000426981 MBLAC1A4D2B0 266 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 RCCD1A6NED2 376 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 EPOPA6NHQ4 379 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 PDE2AO00408 941 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 CCNT1O60563 726 aaKnown RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 MARSP56192 900 aaKnown RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 TNNC1P63316 161 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 MKRN4PQ13434 485 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 SWSAP1Q6NVH7 229 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 PLPPR4Q7Z2D5 763 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 YTHDF3Q7Z739 585 aaKnown RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 PHOSPHO2Q8TCD6 241 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 FAM49AQ9H0Q0 323 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-211ENST00000426981 GDF3Q9NR23 364 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 KDM3AQ9Y4C1 1321 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 A0A0C4DFX4 3053 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 WDR81Q562E7 1941 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 REV3LO60673 3130 aa19.18■□□□□ 0.66
LIMS2-211ENST00000426981 ABHD14A-ACY1A0A1B0GW23 586 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms