RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 OSTNP61366 133 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 NOLC1Q14978 699 aaKnown RBP eCLIP24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 E2F4Q16254 413 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TJAP1Q5JTD0 557 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 DNAJC19Q96DA6 116 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ZBTB45Q96K62 511 aaPredicted RBP24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 SPATA32Q96LK8 384 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 FIZ1Q96SL8 496 aa24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CCDC94Q9BW85 323 aaPredicted RBP24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 SPTBN5Q9NRC6 3674 aaKnown RBP24.47■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PTGESO14684 152 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TOM1L1O75674 476 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 GRM5P41594 1212 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 MATR3P43243 847 aaKnown RBP eCLIP24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 KCNQ1P51787 676 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 COL19A1Q14993 1142 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 ZPBP2Q6X784 338 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 VPS52Q8N1B4 723 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 KCNN1Q92952 543 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 CXCL16Q9H2A7 254 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TLE6Q9H808 572 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 NGRNQ9NPE2 291 aaKnown RBP24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 FAM13BQ9NYF5 915 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 TBX20Q9UMR3 447 aa24.46■■□□□ 1.51
PTCHD3P2-201ENST00000424937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HNRNPDLO14979 420 aaKnown RBP24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LINC01565O15544 149 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 NCK2O43639 380 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 NR1I2O75469 434 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 IDEP14735 1019 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SCP2P22307 547 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LIG4P49917 911 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SMC1AQ14683 1233 aaKnown RBP24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 RESP18Q5W5W9 173 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 DDX53Q86TM3 631 aaKnown RBP24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 IQUBQ8NA54 791 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LEO1Q8WVC0 666 aaPredicted RBP24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 STAMQ92783 540 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 VN1R3Q9BXE9 311 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TNMDQ9H2S6 317 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CUEDC2Q9H467 287 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MARCH5Q9NX47 278 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 XIRP2A4UGR9 3374 aa24.45■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HIDE1A8MVS5 230 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PER2O15055 1255 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 THP07101 528 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 GAP43P17677 238 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 YARSP54577 528 aaKnown RBP24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 GLRA4Q5JXX5 417 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ZBP1Q9H171 429 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TOPORSQ9NS56 1045 aaPredicted RBP24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CACNG4Q9UBN1 327 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SEL1LQ9UBV2 794 aa24.44■■□□□ 1.5
PTCHD3P2-201ENST00000424937 F8W810 466 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 H3BQ06 376 aaPredicted RBP24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 POLR2DO15514 142 aaKnown RBP24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CLDN3O15551 220 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ABCD1P33897 745 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 GTF2BQ00403 316 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TUSC3Q13454 348 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 BMS1Q14692 1282 aaKnown RBP24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 DUSP6Q16828 381 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CTC1Q2NKJ3 1217 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ZC2HC1CQ53FD0 456 aaPredicted RBP24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 EFHBQ8N7U6 833 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MRPL44Q9H9J2 332 aaKnown RBP24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TBC1D7Q9P0N9 293 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ANK1P16157 1881 aa24.43■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CASTOR2A6NHX0 329 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 TBX10O75333 385 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PIGRP01833 764 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 NDUFV1P49821 464 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MCL1Q07820 350 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SEZ6Q53EL9 994 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MAP4K3Q8IVH8 894 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 AUTS2Q8WXX7 1259 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 RABGGTAQ92696 567 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 SNX27Q96L92 541 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CDCA3Q99618 268 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 COLEC11Q9BWP8 271 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LRRC27Q9C0I9 530 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ST6GALNAC4Q9H4F1 302 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PANK4Q9NVE7 773 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 KBTBD4Q9NVX7 518 aa24.42■■□□□ 1.5
PTCHD3P2-201ENST00000424937 A0A0C4DFX4 3053 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 C2orf71A6NGG8 1288 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CTSAP10619 480 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 LTBRP36941 435 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ADAM15Q13444 863 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HERC4Q5GLZ8 1057 aaPredicted RBP24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 CCDC65Q8IXS2 484 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 ACAP3Q96P50 834 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 PAAF1Q9BRP4 392 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 HAPLN2Q9GZV7 340 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 MAGEF1Q9HAY2 307 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 STK39Q9UEW8 545 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 KCNH3Q9ULD8 1083 aa24.41■■□□□ 1.5
PTCHD3P2-201ENST00000424937 VWA8A3KMH1 1905 aa24.4■■□□□ 1.5
PTCHD3P2-201ENST00000424937 FSD2A1L4K1 749 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms