RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 TCRBV16S1A1N1A0A5B0 115 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 KCNK3O14649 394 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 RASGRP1O95267 797 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 FOSP01100 380 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 VCAM1P19320 739 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 IL4RP24394 825 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 SMARCA1P28370 1054 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 PTGS2P35354 604 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 GNALP38405 381 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 GSCP56915 257 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 SMAD3P84022 425 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 TMED1Q13445 227 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 RRP1BQ14684 758 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 PPP2R5BQ15173 497 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 COBLL1Q53SF7 1204 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 AGAP9Q5VTM2 703 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 CCSAPQ6IQ19 270 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 HTR3DQ70Z44 454 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 DDX53Q86TM3 631 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 RAVER1Q8IY67 606 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 CCDC89Q8N998 374 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 SLC7A14Q8TBB6 771 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 THAP3Q8WTV1 239 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 LARP4BQ92615 738 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 GCDHQ92947 438 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 LENG9Q96B70 501 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TBC1D20Q96BZ9 403 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 CCDC34Q96HJ3 373 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 MAML3Q96JK9 1138 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 RNPC3Q96LT9 517 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 TIGD1Q96MW7 591 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 IWS1Q96ST2 819 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 XPO4Q9C0E2 1151 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 TRPV5Q9NQA5 729 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TRMT1Q9NXH9 659 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 KCMF1Q9P0J7 381 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 DENND2AQ9ULE3 1009 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 COQ6Q9Y2Z9 468 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 KAT6BQ8WYB5 2073 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 A0A1W2PRQ8 180 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 C19orf81C9J6K1 198 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TBX3O15119 743 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 MTSS1O43312 755 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 KINO60870 393 aaKnown RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 PRLP01236 227 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 PDGFRBP09619 1106 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 VSIG10L2P0DP72 767 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 ZBTB48P10074 688 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 PSMA3P25788 255 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 BCAR1P56945 870 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 ADAM8P78325 824 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 RBL2Q08999 1139 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 ADAM15Q13444 863 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TMEM132BQ14DG7 1078 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TAF11Q15544 211 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TMEM95Q3KNT9 176 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TM4SF20Q53R12 229 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 SYCP2LQ5T4T6 812 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 C10orf62Q5T681 223 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 RNF187Q5TA31 235 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 FAM111BQ6SJ93 734 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 BRAPQ7Z569 592 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 BMP8AQ7Z5Y6 402 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 MYOCDQ8IZQ8 938 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 GABPB2Q8TAK5 448 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 SH3TC2Q8TF17 1288 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 ZFPM2Q8WW38 1151 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 NKD2Q969F2 451 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 CLIP3Q96DZ5 547 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TMEM176AQ96HP8 235 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 TRIM6Q9C030 488 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 RPAP3Q9H6T3 665 aaPredicted RBP3.31□□□□□ -1.88
PMS1-209ENST00000424059 IRAK4Q9NWZ3 460 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 HDAC9Q9UKV0 1011 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 KIF3AQ9Y496 699 aa3.31□□□□□ -1.88
PMS1-209ENST00000424059 F8VZ95 297 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 PLD2O14939 933 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 RAMP2O60895 175 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 IPO13O94829 963 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 CYP17A1P05093 508 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 KCNA6P17658 529 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 HSD3B2P26439 372 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 MECP2P51608 486 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 NANOS3P60323 173 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 GPSM2P81274 684 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 ATP2C1P98194 919 aaPredicted RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 AMPD3Q01432 767 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 ADCY1Q08828 1119 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 EPHA7Q15375 998 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 VPS72Q15906 364 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 PREPLQ4J6C6 727 aaPredicted RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 TTC38Q5R3I4 469 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 FSTL4Q6MZW2 842 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 PCSK4Q6UW60 755 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 CLEC14AQ86T13 490 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 BRSK2Q8IWQ3 736 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 DNAJC10Q8IXB1 793 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 ARL6IP6Q8N6S5 226 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 CCDC191Q8NCU4 936 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 ATRIPQ8WXE1 791 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms