RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 MYO9BQ13459 2157 aa24.78■■□□□ 1.56
EPDR1-202ENST00000423717 COL4A4P53420 1690 aaPredicted RBP24.78■■□□□ 1.56
EPDR1-202ENST00000423717 TISP43B9A030 160 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 ABLIM1O14639 778 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 KINO60870 393 aaKnown RBP24.77■■□□□ 1.56
EPDR1-202ENST00000423717 NR1I2O75469 434 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 PPP1R37O75864 691 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 PIGRP01833 764 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 RPN1P04843 607 aaKnown RBP24.77■■□□□ 1.56
EPDR1-202ENST00000423717 RB1P06400 928 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 LINC00271P0C7V0 271 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 SNW1Q13573 536 aaKnown RBP24.77■■□□□ 1.56
EPDR1-202ENST00000423717 ZNF280BQ86YH2 543 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 MICALL1Q8N3F8 863 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 KLHL23Q8NBE8 558 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 KCNN1Q92952 543 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 ACAP3Q96P50 834 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 C11orf84Q9BUA3 381 aaPredicted RBP24.77■■□□□ 1.56
EPDR1-202ENST00000423717 MSTO1Q9BUK6 570 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 STRA6Q9BX79 667 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 NRDE2Q9H7Z3 1164 aa24.77■■□□□ 1.56
EPDR1-202ENST00000423717 NT5C1B-RDH14C9J2C7 533 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 KLRC4O43908 158 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 ALDH7A1P49419 539 aaKnown RBP24.76■■□□□ 1.55
EPDR1-202ENST00000423717 BCAR1P56945 870 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 UBE2HP62256 183 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 MCL1Q07820 350 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 PNOCQ13519 176 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 POSTNQ15063 836 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 KCNT2Q6UVM3 1135 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 NELFCDQ8IXH7 590 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 NOC3LQ8WTT2 800 aaKnown RBP24.76■■□□□ 1.55
EPDR1-202ENST00000423717 POMGNT1Q8WZA1 660 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 GBP4Q96PP9 640 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 PLVAPQ9BX97 442 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 HAPLN2Q9GZV7 340 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 TMEM206Q9H813 350 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 ALG13Q9NP73 1137 aaKnown RBP24.76■■□□□ 1.55
EPDR1-202ENST00000423717 TOPORSQ9NS56 1045 aaPredicted RBP24.76■■□□□ 1.55
EPDR1-202ENST00000423717 DNAJB4Q9UDY4 337 aa24.76■■□□□ 1.55
EPDR1-202ENST00000423717 H3BNC9 293 aa24.75■■□□□ 1.55
EPDR1-202ENST00000423717 DDHD2O94830 711 aa24.75■■□□□ 1.55
EPDR1-202ENST00000423717 DPYDQ12882 1025 aa24.75■■□□□ 1.55
EPDR1-202ENST00000423717 SLFN12LQ6IEE8 588 aa24.75■■□□□ 1.55
EPDR1-202ENST00000423717 SLC39A4Q6P5W5 647 aa24.75■■□□□ 1.55
EPDR1-202ENST00000423717 HOOK1Q9UJC3 728 aaKnown RBP24.75■■□□□ 1.55
EPDR1-202ENST00000423717 C5orf67F2Z3F1 127 aa24.74■■□□□ 1.55
EPDR1-202ENST00000423717 OR1G1P47890 313 aa24.74■■□□□ 1.55
EPDR1-202ENST00000423717 ADGRE1Q14246 886 aa24.74■■□□□ 1.55
EPDR1-202ENST00000423717 GLRA4Q5JXX5 417 aa24.74■■□□□ 1.55
EPDR1-202ENST00000423717 CXCL16Q9H2A7 254 aa24.74■■□□□ 1.55
EPDR1-202ENST00000423717 OGTO15294 1046 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 GRM6O15303 877 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 EIF3DO15371 548 aaKnown RBP eCLIP24.73■■□□□ 1.55
EPDR1-202ENST00000423717 FGF18O76093 207 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 THP07101 528 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 TNFSF9P41273 254 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 EHHADHQ08426 723 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 GRIK3Q13003 919 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 PSMD2Q13200 908 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 PPM1EQ8WY54 764 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 P2RX5Q93086 422 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 FAM212AQ96EL1 285 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 TIGD1Q96MW7 591 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 SPG21Q9NZD8 308 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 AGO2Q9UKV8 859 aaKnown RBP24.73■■□□□ 1.55
EPDR1-202ENST00000423717 FAN1Q9Y2M0 1017 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 TRIP11Q15643 1979 aa24.73■■□□□ 1.55
EPDR1-202ENST00000423717 A0A0B4J269 797 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ALDH2P05091 517 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ITGB1P05556 798 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 SLC11A1P49279 550 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 STK4Q13043 487 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 PTPROQ16827 1216 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ZBTB41Q5SVQ8 909 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 GSTCDQ8NEC7 633 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ZNF507Q8TCN5 953 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ERCC4Q92889 916 aaPredicted RBP24.72■■□□□ 1.55
EPDR1-202ENST00000423717 PCIF1Q9H4Z3 704 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 PLAGL2Q9UPG8 496 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 PRG3Q9Y2Y8 225 aaPredicted RBP24.72■■□□□ 1.55
EPDR1-202ENST00000423717 CITO14578 2027 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 PLXNA4Q9HCM2 1894 aa24.72■■□□□ 1.55
EPDR1-202ENST00000423717 ZMYM2Q9UBW7 1377 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 PTGESO14684 152 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 INPPL1O15357 1258 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 B4GALT3O60512 393 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 LPXNO60711 386 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 SMC2O95347 1197 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 GALTP07902 379 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 CLTAP09496 248 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 CXCL8P10145 99 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 PPM1AP35813 382 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 ACOT2P49753 483 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 KRT17Q04695 432 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 CCDC85BQ15834 202 aaPredicted RBP24.71■■□□□ 1.55
EPDR1-202ENST00000423717 KYAT1Q16773 422 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 ARMCX5Q6P1M9 558 aa24.71■■□□□ 1.55
EPDR1-202ENST00000423717 EPM2AIP1Q7L775 607 aaPredicted RBP24.71■■□□□ 1.55
EPDR1-202ENST00000423717 SCFD1Q8WVM8 642 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms