RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 SELPP16109 830 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CCNE1P24864 410 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 PCBP1Q15365 356 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDB1-202ENST00000414411 MAPK6Q16659 721 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 FBXO47Q5MNV8 452 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CREBRFQ8IUR6 639 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 P2RX5Q93086 422 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 DUSP9Q99956 384 aaKnown RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 INO80BQ9C086 356 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 PRMT7Q9NVM4 692 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 NOC2LQ9Y3T9 749 aaKnown RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 UBE4BO95155 1302 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 UMODL1Q5DID0 1318 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CEP290O15078 2479 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TRIM43BA6NCK2 446 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TGFB1I1O43294 461 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TADA3O75528 432 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 HOXA11P31270 313 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 KRT9P35527 623 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 LPIN1Q14693 890 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 ZCWPW2Q504Y3 356 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CENPPQ6IPU0 288 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CYP26C1Q6V0L0 522 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CSGALNACT2Q8N6G5 542 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 MNS1Q8NEH6 495 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TRIM43Q96BQ3 446 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 SCLT1Q96NL6 688 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 ACCSQ96QU6 501 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 IKZF4Q9H2S9 585 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TMEM206Q9H813 350 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 AGO3Q9H9G7 860 aaKnown RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 TMEM39AQ9NV64 488 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 MAGEC2Q9UBF1 373 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 MRFAP1Q9Y605 127 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 ZMYM2Q9UBW7 1377 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 B4GALT5O43286 388 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 KIF20AO95235 890 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 PRKCBP05771 671 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 H2AFXP16104 143 aaPredicted RBP10.83□□□□□ -0.68
DDB1-202ENST00000414411 ITGB8P26012 769 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 SLC39A4Q6P5W5 647 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 FOXR2Q6PJQ5 311 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 USP38Q8NB14 1042 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 CARD6Q9BX69 1037 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 LZTFL1Q9NQ48 299 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 TRAF3IP3Q9Y228 551 aa10.83□□□□□ -0.68
DDB1-202ENST00000414411 A0A0U1RQJ8 604 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 A0A1B0GUA9 196 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TTC26A0AVF1 554 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 PDXKO00764 312 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 KIF5CO60282 957 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TSPAN1O60635 241 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 NBNO60934 754 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TIMP1P01033 207 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ARF4P18085 180 aaPredicted RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 FGFR4P22455 802 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ADSSP30520 456 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 CYP2C18P33260 490 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 CBX1P83916 185 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 STRN3Q13033 797 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ARHGAP29Q52LW3 1261 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ANKRD40Q6AI12 368 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ZPBP2Q6X784 338 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TSHZ1Q6ZSZ6 1077 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 FAM114A1Q8IWE2 563 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ATRIPQ8WXE1 791 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 UBXN4Q92575 508 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 VWCEQ96DN2 955 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ACO2Q99798 780 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 TUBGCP2Q9BSJ2 902 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 IRX2Q9BZI1 471 aaPredicted RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 GBP3Q9H0R5 595 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 OGFRQ9NZT2 677 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ST3GAL5Q9UNP4 418 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 EXOC7Q9UPT5 735 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 STYXL1Q9Y6J8 313 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 CNTNAP2Q9UHC6 1331 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 SCN5AQ14524 2016 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TISP43B9A030 160 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ANKRD63C9JTQ0 380 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ABLIM1O14639 778 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 RPS6KA5O75582 802 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 PARNO95453 639 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 GHRP10912 638 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 PROZP22891 400 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 SNRPFP62306 86 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms