RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 KRT39Q6A163 491 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 RUFY4Q6ZNE9 571 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIAA1328Q86T90 577 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 PALB2Q86YC2 1186 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 CEP120Q8N960 986 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC20A1Q8WUM9 679 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 DHX38Q92620 1227 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 HHIPL1Q96JK4 782 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 MRPL4Q9BYD3 311 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 ADAMTS10Q9H324 1103 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 APOBEC3GQ9HC16 384 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIAA1586Q9HCI6 787 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 RAB20Q9NX57 234 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC5A4Q9NY91 659 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 HDAC6Q9UBN7 1215 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 CPSF3Q9UKF6 684 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 MYH11P35749 1972 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 TRPM7Q96QT4 1865 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 PLXNA1Q9UIW2 1896 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 FAM170AA1A519 330 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 MACROD2A1Z1Q3 448 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TNPO2O14787 897 aaKnown RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 MAGEB2O15479 319 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 ASAP2O43150 1006 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIF5CO60282 957 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TOM1L1O75674 476 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 HLA-DRAP01903 254 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SMIM10L2AP0DMW4 78 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SMIM10L2BP0DMW5 78 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SCP2P22307 547 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 FGFR4P22455 802 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 RGS2P41220 211 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 PSMC4P43686 418 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 MXI1P50539 228 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 ENPEPQ07075 957 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 PPFIA1Q13136 1202 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 NAB2Q15742 525 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC18A3Q16572 532 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZACNQ401N2 412 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TDRD12Q587J7 1177 aaKnown RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 SPOPLQ6IQ16 392 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 EXOC8Q8IYI6 725 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 FAM71AQ8IYT1 594 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TRIB2Q92519 343 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 CARD6Q9BX69 1037 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 IFIH1Q9BYX4 1025 aaKnown RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 INO80BQ9C086 356 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TAS2R14Q9NYV8 317 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 ANKFY1Q9P2R3 1169 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 NAGPAQ9UK23 515 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 MRFAP1Q9Y605 127 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 CAPN6Q9Y6Q1 641 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 COL1A2P08123 1366 aa9.34□□□□□ -0.91
HMGN1P34-201ENST00000413023 UMODL1Q5DID0 1318 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 MBLAC1A4D2B0 266 aaPredicted RBP9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 ENC1O14682 589 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 KIAA0391O15091 583 aaKnown RBP9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 OGTO15294 1046 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 CLDN3O15551 220 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 CYP26A1O43174 497 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 BUB1O43683 1085 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 N4BP1O75113 896 aaKnown RBP9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 GPR32O75388 356 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 MYL3P08590 195 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 ABCD1P33897 745 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 FLT3LGP49771 235 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 PSEN2P49810 448 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 CHMP4BP1P59074 171 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 TMEM62Q0P6H9 643 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 KIF5AQ12840 1032 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 IRF5Q13568 498 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 TFDP1Q14186 410 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 MFSD10Q14728 455 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 MAPK6Q16659 721 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 KIAA0753Q2KHM9 967 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 ATF7IP2Q5U623 682 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 PAPD7Q5XG87 772 aaKnown RBP9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 THNSL1Q8IYQ7 743 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 FBXL13Q8NEE6 735 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 U2AF1L4Q8WU68 220 aaKnown RBP9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 LMBR1Q8WVP7 490 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 SHC3Q92529 594 aa9.33□□□□□ -0.92
HMGN1P34-201ENST00000413023 CPB2Q96IY4 423 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms