RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HARSP12081 509 aaKnown RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 VIPR1P32241 457 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 ARL4AP40617 200 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 DSC2Q02487 901 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 GALNT1Q10472 559 aaPredicted RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 TRIM25Q14258 630 aaKnown RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 POSTNQ15063 836 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 NBPF8Q3BBV2 869 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 WDR45BQ5MNZ6 344 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 TSHZ3Q63HK5 1081 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 GGT6Q6P531 493 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 KCTD1Q719H9 257 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 MSL3Q8N5Y2 521 aaKnown RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 OR10H5Q8NGA6 315 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 IL31RAQ8NI17 732 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 KCNN1Q92952 543 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 FATE1Q969F0 183 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 MYL10Q9BUA6 226 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 MARCH2Q9P0N8 246 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 IFT80Q9P2H3 777 aaPredicted RBP5.75□□□□□ -1.49
LSM5-205ENST00000409952 TTLL3Q9Y4R7 772 aa5.75□□□□□ -1.49
LSM5-205ENST00000409952 A0A1W2PPC4 97 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 A0A1W2PRQ8 180 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 ISM1B1AKI9 464 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 AREL1O15033 823 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 ANP32CO43423 234 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 PLA2G6O60733 806 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 PPP1R11O60927 126 aaPredicted RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 PRPF6O94906 941 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 RPLP2P05387 115 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 PTPN1P18031 435 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 SDHBP21912 280 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 CFPP27918 469 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 KRT9P35527 623 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 TERF1P54274 439 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 EPHA5P54756 1037 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 CCT2P78371 535 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 FOXO1Q12778 655 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 IL10RAQ13651 578 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 ADRM1Q16186 407 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 PFKFB4Q16877 469 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 SLC35G1Q2M3R5 365 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 ALDH1L2Q3SY69 923 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 TTC38Q5R3I4 469 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 ATG14Q6ZNE5 492 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 BRINP3Q76B58 766 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 MIGA2Q7L4E1 593 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 TTC7BQ86TV6 843 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 RTN4RL1Q86UN2 441 aaPredicted RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 RIOX2Q8IUF8 465 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 PCYOX1LQ8NBM8 494 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 KAT5Q92993 513 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 STK33Q9BYT3 514 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 CNTD2Q9H8S5 307 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 C14orf93Q9H972 538 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 ARMT1Q9H993 441 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 UBN1Q9NPG3 1134 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 WASH6PQ9NQA3 447 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 LRFN1Q9P244 771 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 GULP1Q9UBP9 304 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 SMG5Q9UPR3 1016 aaKnown RBP5.74□□□□□ -1.49
LSM5-205ENST00000409952 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
LSM5-205ENST00000409952 A0A1W2PPL8 197 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 PRAMEF25A6NGN4 478 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 FAM90A27PA6NNH2 459 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 B4E171 279 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 MYO1FO00160 1098 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 APOL3O95236 402 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 CYBBP04839 570 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 PFKMP08237 780 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 DBHP09172 617 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 GLI4P10075 376 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 FBLN1P23142 703 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 TSPAN7P41732 249 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 MAPKAPK2P49137 400 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 HK3P52790 923 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 SRSF3P84103 164 aaKnown RBP5.73□□□□□ -1.49
LSM5-205ENST00000409952 FMO1Q01740 532 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 APBA1Q02410 837 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 NR1I3Q14994 352 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 TAF5Q15542 800 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 CNGA2Q16280 664 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 ARL13BQ3SXY8 428 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 MUM1L1Q5H9M0 696 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 MROH9Q5TGP6 573 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 AGAP9Q5VTM2 703 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 BTBD8Q5XKL5 378 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 KIAA1841Q6NSI8 718 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 RPTNQ6XPR3 784 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 AMIGO3Q86WK7 504 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 TMTC1Q8IUR5 882 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 GALNT15Q8N3T1 639 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 ATG16L2Q8NAA4 619 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 OR14C36Q8NHC7 312 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms