RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 LMNTD2Q8IXW0 634 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 CCDC105Q8IYK2 499 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 GDAP1Q8TB36 358 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ARHGEF26Q96DR7 871 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 THAP2Q9H0W7 228 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 MLXIPLQ9NP71 852 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 ETAA1Q9NY74 926 aa16.55■□□□□ 0.24
LIMS2-205ENST00000409455 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 E7ENQ6 273 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 GGPS1O95749 300 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 PECAM1P16284 738 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-205ENST00000409455 CTNNA2P26232 953 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 UBE2SQ16763 222 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 SEL1L2Q5TEA6 688 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 RNF43Q68DV7 783 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 AADACL2Q6P093 401 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 VSTM1Q6UX27 236 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 CYFIP1Q7L576 1253 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 ART4Q93070 314 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 STX2P32856 288 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 CAP2P40123 477 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 SLC12A3P55017 1021 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 ARSHQ5FYA8 562 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 THEMIS2Q5TEJ8 643 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 TTC27Q6P3X3 843 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 SLC30A9Q6PML9 568 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 RHOT2Q8IXI1 618 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 STK33Q9BYT3 514 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
LIMS2-205ENST00000409455 RNPEPL1Q9HAU8 725 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
LIMS2-205ENST00000409455 PCDHA3Q9Y5H8 950 aa16.54■□□□□ 0.24
LIMS2-205ENST00000409455 ANKRD62A6NC57 917 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 SLC26A4O43511 780 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 ACSL3O95573 720 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 SNAP25P60880 206 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 INTS8Q75QN2 995 aaKnown RBP16.53■□□□□ 0.24
LIMS2-205ENST00000409455 SFR1Q86XK3 245 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 OLIG1Q8TAK6 271 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 TEPSINQ96N21 525 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 ALG6Q9Y672 507 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 LRRD1A4D1F6 860 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 BMP3P12645 472 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 TNFAIP3P21580 790 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 PCK1P35558 622 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 MRPS35P82673 323 aaKnown RBP16.53■□□□□ 0.24
LIMS2-205ENST00000409455 DRAP1Q14919 205 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-205ENST00000409455 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 GRAMD1AQ96CP6 724 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 TSC22D3Q99576 134 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 CDC42EP4Q9H3Q1 356 aaKnown RBP16.53■□□□□ 0.24
LIMS2-205ENST00000409455 HACL1Q9UJ83 578 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 COG5Q9UP83 839 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 TMX2Q9Y320 296 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
LIMS2-205ENST00000409455 EIF4E1BA6NMX2 242 aaKnown RBP16.52■□□□□ 0.24
LIMS2-205ENST00000409455 ABLIM1O14639 778 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 ATP5HO75947 161 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 CREB1P16220 341 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 CALB2P22676 271 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 CASP4P49662 377 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
LIMS2-205ENST00000409455 ACVR2BQ13705 512 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 TNFAIP1Q13829 316 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 SETDB1Q15047 1291 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 PARP6Q2NL67 630 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 C11orf63Q6NUN7 778 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 ARHGEF18Q6ZSZ5 1173 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 EPM2AIP1Q7L775 607 aaPredicted RBP16.52■□□□□ 0.24
LIMS2-205ENST00000409455 NAP1L4Q99733 375 aaKnown RBP16.52■□□□□ 0.24
LIMS2-205ENST00000409455 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
LIMS2-205ENST00000409455 LRRC42Q9Y546 428 aa16.52■□□□□ 0.24
LIMS2-205ENST00000409455 FAM170AA1A519 330 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 POTEFA5A3E0 1075 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 POTEIP0CG38 1075 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 BRAFP15056 766 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 GNAZP19086 355 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 HOXD13P35453 343 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 MTFR1Q15390 333 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 POTEGQ6S5H5 508 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 MAEAQ7L5Y9 396 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 MAGEB18Q96M61 343 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 UIMC1Q96RL1 719 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 ZSWIM1Q9BR11 485 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 DNAJC12Q9UKB3 198 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 ASTN1O14525 1302 aa16.52■□□□□ 0.23
LIMS2-205ENST00000409455 SMIM24O75264 130 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 GH1P01241 217 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 ALAS1P13196 640 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 RAD23BP54727 409 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 GIT2Q14161 759 aa16.51■□□□□ 0.23
LIMS2-205ENST00000409455 APLFQ8IW19 511 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms