RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CES2O00748 559 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 DCLK2Q8N568 766 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 CCNYQ8ND76 341 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 STX18Q9P2W9 335 aaKnown RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 HEY2Q9UBP5 337 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 ZHX2Q9Y6X8 837 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 TOB1P50616 345 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 IFRD2Q12894 506 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 MDH1BQ5I0G3 518 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 KIAA0825Q8IV33 1275 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 MAGEC3Q8TD91 643 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 TRIM49P0CI25 452 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 TRIM49CP0CI26 452 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 ATP4AP20648 1035 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 COMTP21964 271 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 TMC3Q7Z5M5 1100 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 GIPC2Q8TF65 315 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 DACT3Q96B18 629 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 ZSCAN5CA6NGD5 496 aaPredicted RBP18.69■□□□□ 0.58
SMPD4-202ENST00000409031 ROBO2Q9HCK4 1378 aa18.69■□□□□ 0.58
SMPD4-202ENST00000409031 TDP2O95551 362 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ATP6V1B1P15313 513 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ATP2B4P23634 1241 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 MEA1Q16626 185 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 DDHD1Q8NEL9 900 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ARHGAP26Q9UNA1 814 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 SERPINB10P48595 397 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ITGB3BPQ13352 177 aaPredicted RBP18.68■□□□□ 0.58
SMPD4-202ENST00000409031 KIF22Q14807 665 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 MAPRE2Q15555 327 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 SPDYCQ5MJ68 293 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 CLMNQ96JQ2 1002 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 RNPEPL1Q9HAU8 725 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 SENP2Q9HC62 589 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 EFCAB6Q5THR3 1501 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 FKBP6O75344 327 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ERVK-9P63128 1117 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 SLC34A1Q06495 639 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 TRAPPC3LQ5T215 181 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 SLC13A5Q86YT5 568 aaPredicted RBP18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ANKMY2Q8IV38 441 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 GID8Q9NWU2 228 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 DTNAQ9Y4J8 743 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 QRICH2Q9H0J4 1663 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 POTEFA5A3E0 1075 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 POTEIP0CG38 1075 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 EFTUD2Q15029 972 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■■■■ 35.4
SMPD4-202ENST00000409031 CEP55Q53EZ4 464 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 GCOM2Q9BZD3 368 aaPredicted RBP18.68■□□□□ 0.58
SMPD4-202ENST00000409031 PKD2L2Q9NZM6 624 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 ZNF229Q9UJW7 825 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 UTYO14607 1347 aa18.68■□□□□ 0.58
SMPD4-202ENST00000409031 GSTA4O15217 222 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 APOA1P02647 267 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 KCNA4P22459 653 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 CASP2P42575 452 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
SMPD4-202ENST00000409031 STRIP2Q9ULQ0 834 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 C2CD2Q9Y426 696 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 ERBB3P21860 1342 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 A0A0G2JLW4 131 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 RSPH10B2B2RC85 870 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 RSPH10BP0C881 870 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 IL10P22301 178 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 LTKP29376 864 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 BTKQ06187 659 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 TMEM260Q9NX78 707 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 CLPTM1O96005 669 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 PBXIP1Q96AQ6 731 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 EMSYQ7Z589 1322 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 WDR46O15213 610 aaKnown RBP18.67■□□□□ 0.58
SMPD4-202ENST00000409031 DAB1O75553 588 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 CYP2D6P10635 497 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 CPA2P48052 419 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 TRPC1P48995 793 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 CENPCQ03188 943 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 TRMT5Q32P41 509 aaKnown RBP18.67■□□□□ 0.58
SMPD4-202ENST00000409031 IZUMO2Q6UXV1 221 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 PRPF39Q86UA1 669 aaKnown RBP18.67■□□□□ 0.58
SMPD4-202ENST00000409031 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
SMPD4-202ENST00000409031 SEPT3Q9UH03 358 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
SMPD4-202ENST00000409031 SMAPO00193 183 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ZBTB5O15062 677 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 FMO5P49326 533 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-202ENST00000409031 SCUBE1Q8IWY4 988 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ZNF483Q8TF39 744 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-202ENST00000409031 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ABCA6Q8N139 1617 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ARHGEF9O43307 516 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 SPAG6O75602 509 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 KRT75O95678 551 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms