RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 MARCH8Q5T0T0 291 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 C10orf76Q5T2E6 689 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 MPZL3Q6UWV2 235 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 RAD9BQ6WBX8 426 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 ENOSF1Q7L5Y1 443 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 CBWD2Q8IUF1 395 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 KIAA0319LQ8IZA0 1049 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 TDHQ8IZJ6 230 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 TRAPPC12Q8WVT3 735 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 JAKMIP2Q96AA8 810 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 PPP1R13BQ96KQ4 1090 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 CCDC42Q96M95 316 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 FNBP1Q96RU3 617 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 FAM213AQ9BRX8 229 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 CRACR2AQ9BSW2 395 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 NHEJ1Q9H9Q4 299 aaPredicted RBP10.62□□□□□ -0.71
POLR1A-202ENST00000409024 IFT122Q9HBG6 1241 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 PTPRHQ9HD43 1115 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 SIX2Q9NPC8 291 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 LUC7LQ9NQ29 371 aaKnown RBP10.62□□□□□ -0.71
POLR1A-202ENST00000409024 MYO1AQ9UBC5 1043 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 APEX2Q9UBZ4 518 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 GABRQQ9UN88 632 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 AKT3Q9Y243 479 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 PAXBP1Q9Y5B6 917 aa10.62□□□□□ -0.71
POLR1A-202ENST00000409024 ATP8B3O60423 1300 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CNTNAP2Q9UHC6 1331 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 SOWAHDA6NJG2 315 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 LRRC53A6NM62 1247 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TISP43B9A030 160 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 EPHB6O15197 1021 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CABYRO75952 493 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 HMGCRP04035 888 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 ADRB2P07550 413 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 MYL3P08590 195 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 MCF2P10911 925 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 FERP16591 822 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 STAT1P42224 750 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TERF1P54274 439 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 JAM2P57087 298 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 IGBP1P78318 339 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 PURAQ00577 322 aaKnown RBP10.61□□□□□ -0.71
POLR1A-202ENST00000409024 PPP3CAQ08209 521 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CBWD6Q4V339 395 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CBWD3Q5JTY5 395 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CBWD5Q5RIA9 395 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 C1orf220Q5T0J3 134 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 ATF7IP2Q5U623 682 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TAF2Q6P1X5 1199 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 C15orf39Q6ZRI6 1047 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 BRSK2Q8IWQ3 736 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 REXO1L1PQ8IX06 675 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TRPV1Q8NER1 839 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 LMO3Q8TAP4 145 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 SAAL1Q96ER3 474 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 FAXDC2Q96IV6 333 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 NLRP4Q96MN2 994 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 GCOM2Q9BZD3 368 aaPredicted RBP10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TSGA10Q9BZW7 698 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 TMEM117Q9H0C3 514 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 INTS2Q9H0H0 1204 aaKnown RBP10.61□□□□□ -0.71
POLR1A-202ENST00000409024 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 HAUS4Q9H6D7 363 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 ZSWIM8A7E2V4 1837 aa10.61□□□□□ -0.71
POLR1A-202ENST00000409024 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 A0A087WZ62 844 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 C17orf102A2RUQ5 167 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 GOLGA8IPA6NC78 632 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 GOLGA8JA6NMD2 632 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 RBAK-RBAKDNI3L0D1 243 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ABLIM1O14639 778 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 IL18RAPO95256 599 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TRIM49P0CI25 452 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TRIM49CP0CI26 452 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 TNNT1P13805 278 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 MATR3P43243 847 aaKnown RBP eCLIP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 MFAP3P55082 362 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 DLG4P78352 724 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 PTPN11Q06124 597 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 SPA17Q15506 151 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ASIC2Q16515 512 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 AMHR2Q16671 573 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ASTE1Q2TB18 679 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 ZACNQ401N2 412 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 GNASQ5JWF2 1037 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 DNTTIP2Q5QJE6 756 aaKnown RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
POLR1A-202ENST00000409024 FAM109BQ6ICB4 259 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 FAM43BQ6ZT52 329 aaPredicted RBP10.6□□□□□ -0.71
POLR1A-202ENST00000409024 NECAB2Q7Z6G3 386 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms