RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 HAUS1Q96CS2 278 aa11.9□□□□□ -0.5
SCFD2-202ENST00000401642 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
SCFD2-202ENST00000401642 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.5
SCFD2-202ENST00000401642 GMLQ99445 158 aa11.9□□□□□ -0.5
SCFD2-202ENST00000401642 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.5
SCFD2-202ENST00000401642 BTNL10A8MVZ5 291 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PI4K2BG5E9Z4 385 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CD58P19256 250 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 LIG4P49917 911 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 HSD17B4P51659 736 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 FMO1Q01740 532 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ZBTB41Q5SVQ8 909 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 KRT39Q6A163 491 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RTKN2Q8IZC4 609 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ZSWIM1Q9BR11 485 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 EPN3Q9H201 632 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 SLITRK6Q9H5Y7 841 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RAB20Q9NX57 234 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CTNND1O60716 968 aaKnown RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RARAP10276 462 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 MAPK4P31152 587 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CDR1P51861 262 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PMS2P54278 862 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 WNT7BP56706 349 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PTENP60484 403 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 KIF22Q14807 665 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RHOT2Q8IXI1 618 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 TMEM161BQ8NDZ6 487 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PARD3BQ8TEW8 1205 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 SPIRE2Q8WWL2 714 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PPM1EQ8WY54 764 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 FAM114A2Q9NRY5 505 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 A0A0A6YYK5 440 aaPredicted RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 H0YGN5 161 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RTN2O75298 545 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 ZBTB48P10074 688 aaPredicted RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RRM1P23921 792 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 PSMC4P43686 418 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 LONRF1Q17RB8 773 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RUFY4Q6ZNE9 571 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
SCFD2-202ENST00000401642 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 FBXL13Q8NEE6 735 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 KAT2BQ92831 832 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CARD9Q9H257 536 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 SLC38A10Q9HBR0 1119 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 UBIAD1Q9Y5Z9 338 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
SCFD2-202ENST00000401642 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 SLC26A4O43511 780 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 VIMP08670 466 aaKnown RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 PPP2R2AP63151 447 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 SGO2Q562F6 1265 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 PCNX4Q63HM2 1172 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 TMEM130Q8N3G9 435 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 TBC1D22BQ9NU19 505 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 HACL1Q9UJ83 578 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 RASAL2Q9UJF2 1139 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 NENFQ9UMX5 172 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 IRF6O14896 467 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 POLGP54098 1239 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 SKOR1P84550 965 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 PRKCEQ02156 737 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 SLC39A4Q6P5W5 647 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 SCARA5Q6ZMJ2 495 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 CYFIP2Q96F07 1278 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 CABS1Q96KC9 395 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 NAP1L3Q99457 506 aaPredicted RBP11.88□□□□□ -0.51
SCFD2-202ENST00000401642 KCNK9Q9NPC2 374 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 CHST7Q9NS84 486 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 INTUQ9ULD6 942 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 CEP350Q5VT06 3117 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
SCFD2-202ENST00000401642 KIAA0391O15091 583 aaKnown RBP11.87□□□□□ -0.51
SCFD2-202ENST00000401642 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
SCFD2-202ENST00000401642 SCP2P22307 547 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms