RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 KLHL29Q96CT2 875 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 BPIFA3Q9BQP9 254 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 CD209Q9NNX6 404 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 ASNSD1Q9NWL6 643 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 GTSE1Q9NYZ3 720 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 FGAP02671 866 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 NCALDP61601 193 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 TMEM132DQ14C87 1099 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 EMILIN2Q9BXX0 1053 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 UPF3AQ9H1J1 476 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 RRP15Q9Y3B9 282 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 TET3O43151 1660 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 TCP1P17987 556 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 RASSF7Q02833 373 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 RNF149Q8NC42 400 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 FAM129AQ9BZQ8 928 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 SEL1LQ9UBV2 794 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 KRT8P05787 483 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 GPR1P46091 355 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 GUCY2DQ02846 1103 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 DGKZQ13574 1117 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 CCDC3Q9BQI4 270 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
CACNA1C-210ENST00000399606 KCNQ2O43526 872 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 PRMT3O60678 531 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SUPT3HO75486 399 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SKAP2O75563 359 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 NDUFV1P49821 464 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 KRT76Q01546 638 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SNX31Q8N9S9 440 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 LSG1Q9H089 658 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ALDH8A1Q9H2A2 487 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CUEDC2Q9H467 287 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CAB39Q9Y376 341 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CYP2C9P11712 490 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 VCLP18206 1134 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SCNN1BP51168 640 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SHCBP1Q8NEM2 672 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 WARS2Q9UGM6 360 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 GTF2A1LQ9UNN4 478 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 OVOS2A0A0G2JMS6 1433 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 OVOS2A0A0J9YW53 1432 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 OVOS2Q6IE36 1432 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ALCAMQ13740 583 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 FBXO18Q8NFZ0 1043 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 TNIP3Q96KP6 325 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 OLFML3Q9NRN5 406 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ARHGAP26Q9UNA1 814 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 hCG_1984214I3L0E3 225 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 FAM173BQ6P4H8 233 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 HDDC2Q7Z4H3 204 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 RASSF3Q86WH2 238 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 ZNF713Q8N859 430 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 C5orf58C9J3I9 102 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 E2F6O75461 281 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 SOX11P35716 441 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CDC42EP1Q00587 391 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
CACNA1C-210ENST00000399606 CYP2C19P33261 490 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms