RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GCNT4Q9P109 453 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 CPSF3Q9UKF6 684 aaKnown RBP22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 ANK1P16157 1881 aa22.17■■□□□ 1.14
VCPKMT-202ENST00000395860 AXLP30530 894 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 FXR1P51114 621 aaKnown RBP eCLIP22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 CETN1Q12798 172 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 NOTUMQ6P988 496 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 APBB1IPQ7Z5R6 666 aaPredicted RBP22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 BRSK2Q8IWQ3 736 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 TC2NQ8N9U0 490 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 POP1Q99575 1024 aaKnown RBP22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 SEZ6LQ9BYH1 1024 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 AGPAT5Q9NUQ2 364 aa22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.16■■□□□ 1.14
VCPKMT-202ENST00000395860 TTC26A0AVF1 554 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 B4GALT4O60513 344 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 MFAP3LO75121 409 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 CHRNA1P02708 482 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 HOXA11P31270 313 aaPredicted RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 OSTNP61366 133 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 LRMPQ12912 555 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TTYH3Q9C0H2 523 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 SENP6Q9GZR1 1112 aaPredicted RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 KCNF1Q9H3M0 494 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 PDE11AQ9HCR9 933 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 CAPN11Q9UMQ6 739 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 P4HA2O15460 535 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TNNI1P19237 187 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 SLC9A1P19634 815 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 PON1P27169 355 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 GTF2H1P32780 548 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 MXI1P50539 228 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 MGAT3Q09327 533 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 DCAF4L1Q3SXM0 396 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 CEP120Q8N960 986 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 DHX38Q92620 1227 aaKnown RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TMEM117Q9H0C3 514 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TRPV6Q9H1D0 765 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TMEM8AQ9HCN3 771 aa22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 TOPORSQ9NS56 1045 aaPredicted RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 PIN4Q9Y237 131 aaKnown RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 LUC7L2Q9Y383 392 aaKnown RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 NOC2LQ9Y3T9 749 aaKnown RBP22.15■■□□□ 1.14
VCPKMT-202ENST00000395860 SGPL1O95470 568 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 WNT7BP56706 349 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 KYAT1Q16773 422 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 KRT39Q6A163 491 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 SLC27A1Q6PCB7 646 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 U2AF1L4Q8WU68 220 aaKnown RBP22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 ARMC5Q96C12 935 aa22.14■■□□□ 1.13
VCPKMT-202ENST00000395860 CITO14578 2027 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 A0A1W2PQJ5 194 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 RNF225M0QZC1 329 aaPredicted RBP22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 EPHB6O15197 1021 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 NRDCO43847 1150 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 RPS6KA5O75582 802 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 TFRCP02786 760 aaKnown RBP22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 KRT9P35527 623 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 SURF1Q15526 300 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 TRIM71Q2Q1W2 868 aaKnown RBP22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 FAM228AQ86W67 206 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 FAM212AQ96EL1 285 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 CGRRF1Q99675 332 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 CRISPLD2Q9H0B8 497 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 RPF1Q9H9Y2 349 aaKnown RBP22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 PLCB1Q9NQ66 1216 aa22.13■■□□□ 1.13
VCPKMT-202ENST00000395860 PMM2O15305 246 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CAND2O75155 1236 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 NPTXRO95502 500 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CLTAP09496 248 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 STAG3L1P0CL83 205 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 ACTN1P12814 892 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CLDN10P78369 228 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 TRIM65Q6PJ69 517 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CACNA2D4Q7Z3S7 1137 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 ZNF397Q8NF99 534 aaPredicted RBP22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CCDC51Q96ER9 411 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CEP72Q9P209 647 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 NOL4O94818 638 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CDK7P50613 346 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 ZBED6P86452 979 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 APBA1Q02410 837 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 ENOX2Q16206 610 aaKnown RBP22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 LMBRD2Q68DH5 695 aaPredicted RBP22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 TMEM192Q8IY95 271 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 PANX2Q96RD6 677 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 EDEM3Q9BZQ6 932 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 INTS2Q9H0H0 1204 aaKnown RBP22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 ABHD10Q9NUJ1 306 aa22.12■■□□□ 1.13
VCPKMT-202ENST00000395860 CXCL8P10145 99 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 POLR2FP61218 127 aaKnown RBP22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 EPC2Q52LR7 807 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 FAM26DQ5JW98 314 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 SV2AQ7L0J3 742 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 EHBP1Q8NDI1 1231 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 CCDC112Q8NEF3 446 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 ZNF516Q92618 1163 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 TRIM6Q9C030 488 aaPredicted RBP22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 RALGAPA2Q2PPJ7 1873 aa22.11■■□□□ 1.13
VCPKMT-202ENST00000395860 IL18RAPO95256 599 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms