RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 ZC3H11AO75152 810 aaKnown RBP eCLIP20.04■□□□□ 0.8
SIL1-202ENST00000394817 EDNRBP24530 442 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 ERVK-9P63128 1117 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 FMO1Q01740 532 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 FSTL1Q12841 308 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 CUL1Q13616 776 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 AFAP1L1Q8TED9 768 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 PORCNQ9H237 461 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 PLEKHA4Q9H4M7 779 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.04■□□□□ 0.81e-6■■■■■ 105.5
SIL1-202ENST00000394817 STYXL1Q9Y6J8 313 aa20.04■□□□□ 0.8
SIL1-202ENST00000394817 ZNF233A6NK53 670 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 EXTL3O43909 919 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 HSF2BPO75031 334 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 FAM153BP0C7A2 387 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 DLATP10515 647 aaKnown RBP20.03■□□□□ 0.8
SIL1-202ENST00000394817 LIG4P49917 911 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 CLDN10P78369 228 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 GCNT1Q02742 428 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 FAM153CQ494X1 144 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 C15orf39Q6ZRI6 1047 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 ENOSF1Q7L5Y1 443 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 OPTNQ96CV9 577 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 FAM213AQ9BRX8 229 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 DDX47Q9H0S4 455 aaKnown RBP20.03■□□□□ 0.8
SIL1-202ENST00000394817 CTTNBP2NLQ9P2B4 639 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 FAM153AQ9UHL3 310 aa20.03■□□□□ 0.8
SIL1-202ENST00000394817 MIF4GDA9UHW6 222 aaKnown RBP20.02■□□□□ 0.8
SIL1-202ENST00000394817 KIAA0391O15091 583 aaKnown RBP20.02■□□□□ 0.8
SIL1-202ENST00000394817 PIGRP01833 764 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 CYP11B1P15538 503 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
SIL1-202ENST00000394817 NAMPTP43490 491 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 PDE6CP51160 858 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 TAF3Q5VWG9 929 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 GOLGA6L1Q8N7Z2 621 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.8
SIL1-202ENST00000394817 CEP89Q96ST8 783 aa20.02■□□□□ 0.8
SIL1-202ENST00000394817 NIFKQ9BYG3 293 aaKnown RBP20.02■□□□□ 0.8
SIL1-202ENST00000394817 OPA1O60313 960 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 FGGP02679 453 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 MMEP08473 750 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 ITGA4P13612 1032 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 CDR2Q01850 454 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 STRN3Q13033 797 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 PSMD6Q15008 389 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 CLUL1Q15846 466 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.79
SIL1-202ENST00000394817 SEPT14Q6ZU15 432 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 PROCA1Q8NCQ7 364 aaPredicted RBP20.02■□□□□ 0.79
SIL1-202ENST00000394817 FAM81BQ96LP2 452 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 NAP1L3Q99457 506 aaPredicted RBP20.02■□□□□ 0.79
SIL1-202ENST00000394817 CLEC11AQ9Y240 323 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 ALG6Q9Y672 507 aa20.02■□□□□ 0.79
SIL1-202ENST00000394817 GOLGA8KD6RF30 607 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 FARP2O94887 1054 aaPredicted RBP20.01■□□□□ 0.79
SIL1-202ENST00000394817 GLRA2P23416 452 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 ECHS1P30084 290 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 ARL2P36404 184 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 PPIL2Q13356 520 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 MOGSQ13724 837 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 TRADDQ15628 312 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 ASAP3Q8TDY4 903 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 DDX1Q92499 740 aaKnown RBP20.01■□□□□ 0.79
SIL1-202ENST00000394817 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 RUFY1Q96T51 708 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 ACP6Q9NPH0 428 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 KCNH4Q9UQ05 1017 aa20.01■□□□□ 0.79
SIL1-202ENST00000394817 FAM170AA1A519 330 aa20■□□□□ 0.79
SIL1-202ENST00000394817 CXCL11O14625 94 aa20■□□□□ 0.79
SIL1-202ENST00000394817 GJA5P36382 358 aa20■□□□□ 0.79
SIL1-202ENST00000394817 IRX3P78415 501 aaPredicted RBP20■□□□□ 0.79
SIL1-202ENST00000394817 ARMC9Q7Z3E5 817 aa20■□□□□ 0.79
SIL1-202ENST00000394817 MAATS1Q7Z4T9 603 aa20■□□□□ 0.79
SIL1-202ENST00000394817 PNMA8AQ86V59 439 aaPredicted RBP20■□□□□ 0.79
SIL1-202ENST00000394817 IQCKQ8N0W5 287 aa20■□□□□ 0.79
SIL1-202ENST00000394817 CCDC26Q8TAB7 109 aa20■□□□□ 0.79
SIL1-202ENST00000394817 MORC4Q8TE76 937 aa20■□□□□ 0.79
SIL1-202ENST00000394817 PSPC1Q8WXF1 523 aaKnown RBP20■□□□□ 0.79
SIL1-202ENST00000394817 SLC7A3Q8WY07 619 aa20■□□□□ 0.79
SIL1-202ENST00000394817 SEC14L1Q92503 715 aa20■□□□□ 0.79
SIL1-202ENST00000394817 ALG3Q92685 438 aa20■□□□□ 0.79
SIL1-202ENST00000394817 TATDN2Q93075 761 aa20■□□□□ 0.79
SIL1-202ENST00000394817 RPS6KC1Q96S38 1066 aa20■□□□□ 0.79
SIL1-202ENST00000394817 SPATC1LQ9H0A9 340 aa20■□□□□ 0.79
SIL1-202ENST00000394817 ASCC2Q9H1I8 757 aaPredicted RBP20■□□□□ 0.79
SIL1-202ENST00000394817 ZNF408Q9H9D4 720 aa20■□□□□ 0.79
SIL1-202ENST00000394817 GTF3C4Q9UKN8 822 aa20■□□□□ 0.79
SIL1-202ENST00000394817 GOLGA6CA6NDK9 693 aa20■□□□□ 0.79
SIL1-202ENST00000394817 CYP1A2P05177 515 aa20■□□□□ 0.79
SIL1-202ENST00000394817 GOLGA6DP0CG33 693 aa20■□□□□ 0.79
SIL1-202ENST00000394817 CAPN2P17655 700 aa20■□□□□ 0.79
SIL1-202ENST00000394817 RFC5P40937 340 aa20■□□□□ 0.79
SIL1-202ENST00000394817 POU5F1Q01860 360 aaKnown RBP20■□□□□ 0.79
SIL1-202ENST00000394817 PPFIA1Q13136 1202 aa20■□□□□ 0.79
SIL1-202ENST00000394817 PPP2R5EQ16537 467 aa20■□□□□ 0.79
SIL1-202ENST00000394817 ZIM3Q96PE6 472 aa20■□□□□ 0.79
SIL1-202ENST00000394817 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
SIL1-202ENST00000394817 C1orf112Q9NSG2 853 aa20■□□□□ 0.79
SIL1-202ENST00000394817 GOLGA6AQ9NYA3 693 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms