RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 KLHL7Q8IXQ5 586 aa16.26■□□□□ 0.19
GPC3-202ENST00000394299 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
GPC3-202ENST00000394299 NT5C1BQ96P26 610 aa16.26■□□□□ 0.19
GPC3-202ENST00000394299 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
GPC3-202ENST00000394299 MCM3APO60318 1980 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 A0A0A6YYK5 440 aaPredicted RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 GLTPD2A6NH11 291 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 NOP56O00567 594 aaKnown RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 MAFO75444 373 aaPredicted RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 ITIH3Q06033 890 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 IFI16Q16666 785 aaKnown RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 LDLRAD1Q5T700 205 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 FAM160B1Q5W0V3 765 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 ZBTB33Q86T24 672 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
GPC3-202ENST00000394299 RFFLQ8WZ73 363 aa16.25■□□□□ 0.19
GPC3-202ENST00000394299 ANKRD62A6NC57 917 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
GPC3-202ENST00000394299 CYP11B1P15538 503 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 TNFSF9P41273 254 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 FMO1Q01740 532 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 TDRD10Q5VZ19 366 aaKnown RBP16.24■□□□□ 0.19
GPC3-202ENST00000394299 CPNE8Q86YQ8 564 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 AFAP1L1Q8TED9 768 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 MSTO1Q9BUK6 570 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 KRT5P13647 590 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
GPC3-202ENST00000394299 C8orf74Q6P047 294 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 CCDC62Q6P9F0 684 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 C15orf39Q6ZRI6 1047 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
GPC3-202ENST00000394299 BTBD6Q96KE9 485 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 STYXL1Q9Y6J8 313 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 NCANO14594 1321 aa16.24■□□□□ 0.19
GPC3-202ENST00000394299 TMEM110-MUSTN1A8MSY1 372 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 ADCY3O60266 1144 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 VNN1O95497 513 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 C4BPAP04003 597 aaKnown RBP16.23■□□□□ 0.19
GPC3-202ENST00000394299 TUBBP07437 444 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 ITGA4P13612 1032 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 BIRC3Q13489 604 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 PLCB4Q15147 1175 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 GPR162Q16538 588 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 PHLDB2Q86SQ0 1253 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 ISCUQ9H1K1 167 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
GPC3-202ENST00000394299 A0A0B4J269 797 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 HLA-DRAP01903 254 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 RFC5P40937 340 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 SNAPC2Q13487 334 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 PSMD6Q15008 389 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 AADACL2Q6P093 401 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 RNF149Q8NC42 400 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 HES6Q96HZ4 224 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 STIM2Q9P246 746 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 CTTNBP2NLQ9P2B4 639 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 RNF14Q9UBS8 474 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
GPC3-202ENST00000394299 H0YCG3 227 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 PHACTR2O75167 634 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 CSDE1O75534 798 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 LAMTOR4Q0VGL1 99 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 ZNF211Q13398 564 aaPredicted RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 TERF2Q15554 542 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 DCAF12L1Q5VU92 463 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 DDX1Q92499 740 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 SELENOOQ9BVL4 669 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 RNPEPQ9H4A4 650 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 APOBEC3GQ9HC16 384 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 SUCLA2Q9P2R7 463 aaPredicted RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 NR2E1Q9Y466 385 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 DDX3YO15523 660 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 GTF2H1P32780 548 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 CARSP49589 748 aaKnown RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 IGBP1P78318 339 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 ZACNQ401N2 412 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 NAA35Q5VZE5 725 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 RHPN2Q8IUC4 686 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
GPC3-202ENST00000394299 FAM212AQ96EL1 285 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 TCHPQ9BT92 498 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 EPB41L5Q9HCM4 733 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 DAAM1Q9Y4D1 1078 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
GPC3-202ENST00000394299 PDHXO00330 501 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 RAD51CO43502 376 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 RTN2O75298 545 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CLSTN1O94985 981 aa16.21■□□□□ 0.19
GPC3-202ENST00000394299 CFHP08603 1231 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms