RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SEM1Q6ZVN7 128 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 SYT12Q8IV01 421 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 OR2I1PQ8NGU4 316 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 ATXN2LQ8WWM7 1075 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 FUBP1Q96AE4 644 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 CEP95Q96GE4 821 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 FUBP3Q96I24 572 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 DCLRE1CQ96SD1 692 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 CPPED1Q9BRF8 314 aaPredicted RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 NDC1Q9BTX1 674 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 TCF7L1Q9HCS4 588 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 GPRC5BQ9NZH0 403 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 NCDNQ9UBB6 729 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 FZD1Q9UP38 647 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 NOP58Q9Y2X3 529 aaKnown RBP3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 CHST2Q9Y4C5 530 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 HS3ST4Q9Y661 456 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 COL4A3Q01955 1670 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 TNKSO95271 1327 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 PNPLA7Q6ZV29 1317 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 SHROOM4Q9ULL8 1493 aa3.16□□□□□ -1.9
RNU6-541P-201ENST00000384709 KLHL33A6NCF5 533 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 CXorf49A8MYA2 514 aaPredicted RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ADCY6O43306 1168 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 SGTAO43765 313 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 NDUFS2O75306 463 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 PPFIA4O75335 1185 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 OSMP13725 252 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 HSP90B1P14625 803 aaKnown RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZSCAN20P17040 1043 aaPredicted RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 EDNRBP24530 442 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 MGAT1P26572 445 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ADKP55263 362 aaKnown RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 MTM1Q13496 603 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 TUBA3CQ13748 450 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 LSM12Q3MHD2 195 aaKnown RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 FAM102AQ5T9C2 384 aaPredicted RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ANKS6Q68DC2 871 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 TUBA3EQ6PEY2 450 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ULK2Q8IYT8 1036 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 FAM177A1Q8N128 213 aaPredicted RBP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 MDM1Q8TC05 714 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 PLEKHG4BQ96PX9 1271 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 ADI1Q9BV57 179 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC46A2Q9BY10 475 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCED1AQ9H1Q7 454 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 LANCL2Q9NS86 450 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 IPPQ9Y573 584 aa3.15□□□□□ -1.91
RNU6-541P-201ENST00000384709 COL11A2P13942 1736 aaPredicted RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 GAGE12BA1L429 117 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 GAGE12HA6NDE8 117 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 TMEM200CA6NKL6 621 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MARCH11A6NNE9 402 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 AHRRA9YTQ3 701 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 TEX33O43247 280 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 AKAP8O43823 692 aaKnown RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 KATNA1O75449 491 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZRANB2O95218 330 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 AMY1AP04745 511 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 SNRPA1P09661 255 aaKnown RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 GSPT1P15170 499 aaKnown RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 C5AR1P21730 350 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 ADSLP30566 484 aaPredicted RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 BMPR1AP36894 532 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 CLRN1P58418 232 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 DGCR2P98153 550 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 EXOSC10Q01780 885 aaKnown RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 CRHR2Q13324 411 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 PCBP2Q15366 365 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 BRDTQ58F21 947 aaPredicted RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 DACT2Q5SW24 774 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 IGFL4Q6B9Z1 124 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 Q6ZPA2 131 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MRGPREQ86SM8 312 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 XYLT1Q86Y38 959 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 AMOTL1Q8IY63 956 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 PQLC1Q8N2U9 271 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MB21D1Q8N884 522 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 REPS2Q8NFH8 660 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 ZFP28Q8NHY6 868 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 SLC35B2Q8TB61 432 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 NRG4Q8WWG1 115 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 COA7Q96BR5 231 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MYEOVQ96EZ4 313 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 TEKT5Q96M29 485 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 DMRTA2Q96SC8 542 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 CCDC8Q9H0W5 538 aaPredicted RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MANSC1Q9H8J5 431 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 DMRT3Q9NQL9 472 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 HOMER2Q9NSB8 354 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MKS1Q9NXB0 559 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 MOCS1Q9NZB8 636 aa3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 ARHGEF17Q96PE2 2063 aaPredicted RBP3.14□□□□□ -1.91
RNU6-541P-201ENST00000384709 LOC105371045A0A1W2PR82 267 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 ANKRD62A6NC57 917 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 DRGXA6NNA5 263 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 PRR5-ARHGAP8B1AHC4 643 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 LEFTY2O00292 366 aa3.13□□□□□ -1.91
RNU6-541P-201ENST00000384709 HTRA2O43464 458 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms