RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DNAJC18Q9H819 358 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 TUFT1Q9NNX1 390 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 KCND1Q9NSA2 647 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 COMMD10Q9Y6G5 202 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 A0A1W2PQC6 194 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 MAPK4P31152 587 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 RAD23BP54727 409 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 KCNA1Q09470 495 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 GLE1Q53GS7 698 aaKnown RBP20.1■□□□□ 0.81
CSPG5-202ENST00000383738 GMCL1P1Q8NEA9 526 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 RAPGEF5Q92565 580 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 C11orf70Q9BRQ4 267 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 DCTN4Q9UJW0 460 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 MAGED2Q9UNF1 606 aaPredicted RBP20.1■□□□□ 0.81
CSPG5-202ENST00000383738 LMO7Q8WWI1 1683 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 ARHGAP42A6NI28 874 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 FUT2Q10981 343 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 HACE1Q8IYU2 909 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 HIPK4Q8NE63 616 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 SPATC1LQ9H0A9 340 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 HSPBP1Q9NZL4 362 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 G3BP2Q9UN86 482 aaKnown RBP20.1■□□□□ 0.81
CSPG5-202ENST00000383738 ITIH6Q6UXX5 1313 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 SCTRP47872 440 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 GNASQ5JWF2 1037 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PAPD7Q5XG87 772 aaKnown RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 SLC17A8Q8NDX2 589 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 POP1Q99575 1024 aaKnown RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 KIAA1683Q9H0B3 1180 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 FGFR1OP2Q9NVK5 253 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 ARHGAP20Q9P2F6 1191 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PITPNM2Q9BZ72 1349 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 RASSF2P50749 326 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 CUL1Q13616 776 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PSMD6Q15008 389 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 SLC30A5Q8TAD4 765 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 RILPQ96NA2 401 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 FERMT1Q9BQL6 677 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PITPNM3Q9BZ71 974 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PPP1R11O60927 126 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 RARBP10826 455 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 CCDC62Q6P9F0 684 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 DTX3LQ8TDB6 740 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 CBWD1Q9BRT8 395 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 A1CFQ9NQ94 594 aaKnown RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 NFKBIEO00221 500 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 CYP26A1O43174 497 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 ANP32DO95626 131 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 BFSP1Q12934 665 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 SUGP1Q8IWZ8 645 aaKnown RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 PNMA5Q96PV4 448 aa20.09■□□□□ 0.81
CSPG5-202ENST00000383738 ASCC2Q9H1I8 757 aaPredicted RBP20.09■□□□□ 0.81
CSPG5-202ENST00000383738 MEIS2O14770 477 aa20.08■□□□□ 0.81
CSPG5-202ENST00000383738 RANBP1P43487 201 aa20.08■□□□□ 0.81
CSPG5-202ENST00000383738 IL17AQ16552 155 aa20.08■□□□□ 0.81
CSPG5-202ENST00000383738 RAB3IPQ96QF0 476 aaPredicted RBP20.08■□□□□ 0.81
CSPG5-202ENST00000383738 HEMGNQ9BXL5 484 aa20.08■□□□□ 0.81
CSPG5-202ENST00000383738 KBTBD4Q9NVX7 518 aa20.08■□□□□ 0.81
CSPG5-202ENST00000383738 DGAT1O75907 488 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 EMC2Q15006 297 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 OR6B2Q6IFH4 312 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 MMGT1Q8N4V1 131 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 RIT2Q99578 217 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 CNOT10Q9H9A5 744 aaKnown RBP20.08■□□□□ 0.8
CSPG5-202ENST00000383738 TISP43B9A030 160 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 TBX3O15119 743 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 WDR72Q3MJ13 1102 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 CALN1Q9BXU9 219 aa20.08■□□□□ 0.8
CSPG5-202ENST00000383738 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 A0A087X0T9 212 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 ASB14A6NK59 587 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 FAM228BP0C875 321 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 ORC2Q13416 577 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 CASC4Q6P4E1 433 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 RSPH3Q86UC2 560 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 CTAGE3PQ8IX95 158 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 PDCD7Q8N8D1 485 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 LRRC8CQ8TDW0 803 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 INTS2Q9H0H0 1204 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 DDX20Q9UHI6 824 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 ZNF148Q9UQR1 794 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 TOPAZ1Q8N9V7 1692 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 GAS8O95995 478 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 PMS2P54278 862 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 ZNF667Q5HYK9 610 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 IKZF4Q9H2S9 585 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 SEMA6BQ9H3T3 888 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 STAM2O75886 525 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 CETPP11597 493 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 CIITAP33076 1130 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 KCNJ1P48048 391 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 GABPAQ06546 454 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 LONRF1Q17RB8 773 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 TMCO4Q5TGY1 634 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 SYT2Q8N9I0 419 aaPredicted RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 PBKQ96KB5 322 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 XPO6Q96QU8 1125 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 PXMP2Q9NR77 195 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms