RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
RPP40-202ENST00000380051 ARMCX3Q9UH62 379 aaPredicted RBP16.4■□□□□ 0.22
RPP40-202ENST00000380051 LIMA1Q9UHB6 759 aaKnown RBP16.4■□□□□ 0.22
RPP40-202ENST00000380051 CPSF3Q9UKF6 684 aaKnown RBP16.4■□□□□ 0.22
RPP40-202ENST00000380051 CLTAP09496 248 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 SKIP12755 728 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 KRT13P13646 458 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 GRM5P41594 1212 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
RPP40-202ENST00000380051 ACOT2P49753 483 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 HSP90AA4PQ58FG1 418 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 MFSD5Q6N075 450 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 USP37Q86T82 979 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 CBWD2Q8IUF1 395 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 THNSL1Q8IYQ7 743 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 ZSWIM2Q8NEG5 633 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
RPP40-202ENST00000380051 EIF2AQ9BY44 585 aaKnown RBP16.39■□□□□ 0.21
RPP40-202ENST00000380051 GRPEL1Q9HAV7 217 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 TANC1Q9C0D5 1861 aa16.39■□□□□ 0.21
RPP40-202ENST00000380051 TPM2P07951 284 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 STAG3L1P0CL83 205 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 MRE11P49959 708 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 RAB27AP51159 221 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 PPP2R3AQ06190 1150 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 SURF1Q15526 300 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 ACAP3Q96P50 834 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
RPP40-202ENST00000380051 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
RPP40-202ENST00000380051 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 ZNF623O75123 536 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 SERPINC1P01008 464 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
RPP40-202ENST00000380051 VAMP7P51809 220 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 FANCCQ00597 558 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 CYP24A1Q07973 514 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 BFSP1Q12934 665 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 KRT31Q15323 416 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 SARM1Q6SZW1 724 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 BRSK2Q8IWQ3 736 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 HACE1Q8IYU2 909 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
RPP40-202ENST00000380051 ADAM2Q99965 735 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 FAM105AQ9NUU6 356 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 RBAKQ9NYW8 714 aaPredicted RBP16.37■□□□□ 0.21
RPP40-202ENST00000380051 PCDHB2Q9Y5E7 798 aa16.37■□□□□ 0.21
RPP40-202ENST00000380051 A0A0U1RQF3 1178 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 MGEA5O60502 916 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 ADRB2P07550 413 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 ITGB8P26012 769 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 TNFSF9P41273 254 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
RPP40-202ENST00000380051 PSMD6Q15008 389 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 FILIP1LQ4L180 1135 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 SEZ6Q53EL9 994 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 ZBTB41Q5SVQ8 909 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 MRPL10Q7Z7H8 261 aaKnown RBP16.36■□□□□ 0.21
RPP40-202ENST00000380051 CD302Q8IX05 232 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 CEP120Q8N960 986 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
RPP40-202ENST00000380051 PLEKHA5Q9HAU0 1116 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 IPPQ9Y573 584 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPP40-202ENST00000380051 ALPK3Q96L96 1907 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
RPP40-202ENST00000380051 SCN5AQ14524 2016 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 EVI5O60447 810 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 STX10O60499 249 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 IL18RAPO95256 599 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 PFKMP08237 780 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 YARSP54577 528 aaKnown RBP16.35■□□□□ 0.21
RPP40-202ENST00000380051 OSTNP61366 133 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 FAM189BP81408 668 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 CNKSR3Q6P9H4 555 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 SLC24A5Q71RS6 500 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 APTXQ7Z2E3 356 aaKnown RBP16.35■□□□□ 0.21
RPP40-202ENST00000380051 DEFB128Q7Z7B8 93 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
RPP40-202ENST00000380051 SMG8Q8ND04 991 aaKnown RBP16.35■□□□□ 0.21
RPP40-202ENST00000380051 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 PGBD4Q96DM1 585 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 ASB7Q9H672 318 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 SNTG2Q9NY99 539 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 C9IYK1 514 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 ENPP3O14638 875 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 CBFA2T2O43439 604 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 EOMESO95936 686 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 UBASH3AP57075 661 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 ENOX2Q16206 610 aaKnown RBP16.35■□□□□ 0.21
RPP40-202ENST00000380051 VWA3BQ502W6 1294 aa16.35■□□□□ 0.21
RPP40-202ENST00000380051 TMEM192Q8IY95 271 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms