RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 EXOC3O60645 756 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 PEX11AO75192 247 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 IVDP26440 423 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 TARSP26639 723 aaKnown RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 ACVR2BQ13705 512 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 SLC15A2Q16348 729 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 INTS8Q75QN2 995 aaKnown RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 PARD3BQ8TEW8 1205 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 ERP27Q96DN0 273 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 PAIP2Q9BPZ3 127 aaKnown RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 RNPEPL1Q9HAU8 725 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 TXLNGQ9NUQ3 528 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 FOCADQ5VW36 1801 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 TAF1LQ8IZX4 1826 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 GM2AP17900 193 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 RWDD2BP57060 319 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 PRUNE1Q86TP1 453 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 VSIG1Q86XK7 387 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 ZBTB10Q96DT7 871 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 HAO1Q9UJM8 370 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 EMSYQ7Z589 1322 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 MTA2O94776 668 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 IL1R1P14778 569 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 ITIH2P19823 946 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 VPS41P49754 854 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 SHROOM1Q2M3G4 852 aaPredicted RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 USH1GQ495M9 461 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 C15orf52Q6ZUT6 534 aaKnown RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 NOP9Q86U38 636 aaKnown RBP17.65■□□□□ 0.42
TRIM39-201ENST00000376656 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 SNF8Q96H20 258 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 ADGRA3Q8IWK6 1321 aa17.65■□□□□ 0.42
TRIM39-201ENST00000376656 RAD23BP54727 409 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 WDR4P57081 412 aaKnown RBP17.64■□□□□ 0.41
TRIM39-201ENST00000376656 SARNPP82979 210 aaKnown RBP17.64■□□□□ 0.41
TRIM39-201ENST00000376656 STRN3Q13033 797 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 TMEM63BQ5T3F8 832 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 ANO7Q6IWH7 933 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 MORC4Q8TE76 937 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 PSPC1Q8WXF1 523 aaKnown RBP17.64■□□□□ 0.41
TRIM39-201ENST00000376656 SPOCK2Q92563 424 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 DYDC2Q96IM9 177 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
TRIM39-201ENST00000376656 LRMDAQ9H2I8 198 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 CHKBQ9Y259 395 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 CHMP2AO43633 222 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 CALB2P22676 271 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 SLCO2A1Q92959 643 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 LRRC42Q9Y546 428 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 DPPA5A6NC42 116 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 ATP4AP20648 1035 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 HOXA13P31271 388 aaPredicted RBP17.64■□□□□ 0.41
TRIM39-201ENST00000376656 SREBF1P36956 1147 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 PPP3CAQ08209 521 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 PARP6Q2NL67 630 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 THEMIS2Q5TEJ8 643 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 KIAA0825Q8IV33 1275 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 FAM13CQ8NE31 585 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 EPS8L1Q8TE68 723 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 LGALS13Q9UHV8 139 aa17.64■□□□□ 0.41
TRIM39-201ENST00000376656 FSCN2O14926 492 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 SLITRK3O94933 977 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 RFX1P22670 979 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 POLGP54098 1239 aaPredicted RBP17.63■□□□□ 0.41
TRIM39-201ENST00000376656 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 HSD17B14Q9BPX1 270 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 HERPUD2Q9BSE4 406 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 PCIF1Q9H4Z3 704 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 TCEA3O75764 348 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 TPBGLP0DKB5 382 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 GCLMP48507 274 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 DNAJC3Q13217 504 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 ODR4Q5SWX8 454 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 ZNF653Q96CK0 615 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 NOCTQ9UK39 431 aaKnown RBP17.63■□□□□ 0.41
TRIM39-201ENST00000376656 STK24Q9Y6E0 443 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 CNTNAP4Q9C0A0 1308 aa17.63■□□□□ 0.41
TRIM39-201ENST00000376656 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
TRIM39-201ENST00000376656 TISP43B9A030 160 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 CTCFP49711 727 aaPredicted RBP17.62■□□□□ 0.41
TRIM39-201ENST00000376656 BIRC2Q13490 618 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 RBM26Q5T8P6 1007 aaKnown RBP17.62■□□□□ 0.41
TRIM39-201ENST00000376656 STK32AQ8WU08 396 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 C9orf72Q96LT7 481 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 KIAA1683Q9H0B3 1180 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 ANAPC5Q9UJX4 755 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 SPAG7O75391 227 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 ZNF76P36508 570 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 TUBP50607 506 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 SETDB1Q15047 1291 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 PPP1R21Q6ZMI0 780 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 SLC47A2Q86VL8 602 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 SYCP3Q8IZU3 236 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 ANKRD27Q96NW4 1050 aa17.62■□□□□ 0.41
TRIM39-201ENST00000376656 SH3GL3Q99963 347 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms