RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PI4K2BG5E9Z4 385 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 SLC26A4O43511 780 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 LDHAP00338 332 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 SH3GL3Q99963 347 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 SLC13A4Q9UKG4 626 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 PRR12Q9ULL5 1215 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 FOXP2O15409 715 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF18P17022 549 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 CASP1P29466 404 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 PSMC5P62195 406 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 ANGEL2Q5VTE6 544 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 DHX40Q8IX18 779 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 RTFDC1Q9BY42 306 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 MTFR1LQ9H019 292 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 TBX3O15119 743 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 NR3C1P04150 777 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 HDAC4P56524 1084 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
NPLOC4-202ENST00000374747 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 HNRNPCL1O60812 293 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 KCNB1Q14721 858 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TMEM35BQ8NCS4 154 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TEX13BQ9BXU2 312 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 VPS11Q9H270 941 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 GTSE1Q9NYZ3 720 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 PPARGP37231 505 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 KCNH2Q12809 1159 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TEKT2Q9UIF3 430 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 CCDC22O60826 627 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 PPP1R37O75864 691 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 RANBP1P43487 201 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 LRRC14Q15048 493 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 EIF2AK1Q9BQI3 630 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 CYP26B1Q9NR63 512 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 FCER1AP12319 257 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 PPP6R3Q5H9R7 873 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 RARS2Q5T160 578 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF564Q8TBZ8 553 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 SNF8Q96H20 258 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 JMJD4Q9H9V9 463 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 TUFT1Q9NNX1 390 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
NPLOC4-202ENST00000374747 GOLGA8MH3BSY2 632 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ARHGEF9O43307 516 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 DIAPH2O60879 1101 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 CALB1P05937 261 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 NEK2P51955 445 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 OSTNP61366 133 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 GUCY1A3Q02108 690 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 MMP19Q99542 508 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ZNF302Q9NR11 478 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 OLA1Q9NTK5 396 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 GGA3Q9NZ52 723 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 HACL1Q9UJ83 578 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 VSNL1P62760 191 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 FLOT2Q14254 428 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 LXNQ9BS40 222 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 TMEM39BQ9GZU3 492 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 VIPAS39Q9H9C1 493 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 STX18Q9P2W9 335 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 TTC7AQ9ULT0 858 aaPredicted RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 FAM205AQ6ZU69 1335 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 CCDC195A0A1B0GUA6 201 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 CFAP69A5D8W1 941 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 DNAJC6O75061 913 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ATP1A1P05023 1023 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 DHX34Q14147 1143 aaKnown RBP13□□□□□ -0.33
NPLOC4-202ENST00000374747 PPM1NQ8N819 430 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 EHD4Q9H223 541 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 ASNSD1Q9NWL6 643 aa13□□□□□ -0.33
NPLOC4-202ENST00000374747 KLHL8Q9P2G9 620 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms