RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 GDF15Q99988 308 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 AGO2Q9UKV8 859 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 A0A1W2PQJ5 194 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LRRIQ4A6NIV6 560 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SOX10P56693 466 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PARD3BQ8TEW8 1205 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SAMD11Q96NU1 681 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 HTTP42858 3142 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SYCE3A1L190 88 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MGEA5O60502 916 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SORBS3O60504 671 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 C4BPAP04003 597 aaKnown RBP12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TCTN1Q2MV58 587 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 METTL13Q8N6R0 699 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LMO3Q8TAP4 145 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LIG4P49917 911 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CAMK4Q16566 473 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 OSMRQ99650 979 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MRPL9Q9BYD2 267 aaKnown RBP12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC38A7Q9NVC3 462 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ACTN1P12814 892 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 IDEP14735 1019 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 BFSP1Q12934 665 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GRIK3Q13003 919 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NR1I3Q14994 352 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TTC39CQ8N584 583 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 STAMQ92783 540 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CLP1Q92989 425 aaKnown RBP12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC35C1Q96A29 364 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MRFAP1L1Q96HT8 127 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ADPGKQ9BRR6 497 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SUGCTQ9HAC7 445 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GDAP2Q9NXN4 497 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PTPRDP23468 1912 aa12.15□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ZNF233A6NK53 670 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CLDN3O15551 220 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ERLIN2O94905 339 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 POU2F2P09086 479 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 STAG3L1P0CL83 205 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZNF165P49910 485 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FPGSQ05932 587 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KCNA1Q09470 495 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ENOX2Q16206 610 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 IPPQ9Y573 584 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 AKAP3O75969 853 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SSBP05455 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ITGB8P26012 769 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZACNQ401N2 412 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TMEM240Q5SV17 173 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DRC7Q8IY82 874 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 LZTS1Q9Y250 596 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 LGALS16A8MUM7 142 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PIRO00625 290 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DGKIO75912 1065 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 IGBP1P78318 339 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SNRNP35Q16560 246 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SLC10A6Q3KNW5 377 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FMNL3Q8IVF7 1028 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CASD1Q96PB1 797 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NAA15Q9BXJ9 866 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RWDD3Q9Y3V2 267 aa12.14□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 OFD1O75665 1012 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CYP11A1P05108 521 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 EPB41P11171 864 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TOPORSQ9NS56 1045 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ANXA13P27216 316 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ADAM9Q13443 819 aa12.13□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ARMCX5Q6P1M9 558 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms