RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LMCD1Q9NZU5 365 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 MED26O95402 600 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 IL6P05231 212 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 FBLN1P23142 703 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 RWDD4Q6NW29 188 aaKnown RBP16.08■□□□□ 0.16
COL5A1-201ENST00000371817 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 AIPL1Q9NZN9 384 aa16.08■□□□□ 0.16
COL5A1-201ENST00000371817 MAP3K13O43283 966 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ROR1Q01973 937 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 IZUMO3Q5VZ72 239 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 DENND6AQ8IWF6 608 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 FAM89AQ96GI7 184 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 NUP160Q12769 1436 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 UGGT2Q9NYU1 1516 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 INSRP06213 1382 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ADGRF5Q8IZF2 1346 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 C5orf58C9J3I9 102 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ALCAMQ13740 583 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 RIBC1Q8N443 379 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 RBBP8NLQ8NC74 664 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 FLT4P35916 1363 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 NEMP1O14524 444 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 PPIDQ08752 370 aaKnown RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 CNOT8Q9UFF9 292 aaKnown RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 PECAM1P16284 738 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 CYP4A22Q5TCH4 519 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ZNF862O60290 1169 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ITGAXP20702 1163 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 TFDP2Q14188 446 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 OASLQ15646 514 aaKnown RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 RHPN2Q8IUC4 686 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 HMG20AQ9NP66 347 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ATP8B3O60423 1300 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ARSEP51690 589 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 BNIPLQ7Z465 357 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ENKURQ8TC29 256 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 TMEM120BA0PK00 339 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 KCNJ6P48051 423 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 DDX18Q9NVP1 670 aaKnown RBP16.07■□□□□ 0.16
COL5A1-201ENST00000371817 CACNA2D2Q9NY47 1150 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 LRCH1Q9Y2L9 728 aa16.07■□□□□ 0.16
COL5A1-201ENST00000371817 PFASO15067 1338 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 SRP72O76094 671 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 YWHABP31946 246 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 SPANXN2Q5MJ10 180 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 HEATR6Q6AI08 1181 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 HDHD2Q9H0R4 259 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 AKR1D1P51857 326 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 TFDP1Q14186 410 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 MICALL2Q8IY33 904 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 ZNF564Q8TBZ8 553 aaPredicted RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 SNX12Q9UMY4 172 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 PCP4L1A6NKN8 68 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 BTN3A3O00478 584 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 ZCCHC7Q8N3Z6 543 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 IFT43Q96FT9 208 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 EGFL8Q99944 293 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 P4HA2O15460 535 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 TAS2R42Q7RTR8 314 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 RNF139Q8WU17 664 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 C17orf80Q9BSJ5 609 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 FKBP9O95302 570 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 FKBP9P1Q75LS8 142 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 MDM1Q8TC05 714 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 SCFD1Q8WVM8 642 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 SARSP49591 514 aaKnown RBP16.06■□□□□ 0.16
COL5A1-201ENST00000371817 FAM45AQ8TCE6 357 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 TRIM54Q9BYV2 358 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 BABAM1Q9NWV8 329 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 PRR23AA6NEV1 266 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 AP1G2O75843 785 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 FAM81AQ8TBF8 368 aa16.06■□□□□ 0.16
COL5A1-201ENST00000371817 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
COL5A1-201ENST00000371817 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
COL5A1-201ENST00000371817 G2E3Q7L622 706 aa16.05■□□□□ 0.16
COL5A1-201ENST00000371817 SUGP1Q8IWZ8 645 aaKnown RBP16.05■□□□□ 0.16
COL5A1-201ENST00000371817 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
COL5A1-201ENST00000371817 ZFP42Q96MM3 310 aa16.05■□□□□ 0.16
COL5A1-201ENST00000371817 ASNSD1Q9NWL6 643 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms