RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CEP120Q8N960 986 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 COLGALT1Q8NBJ5 622 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 GLIS3Q8NEA6 775 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 STRA6Q9BX79 667 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 TMEM206Q9H813 350 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 PCDHB12Q9Y5F1 795 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
COL9A1-204ENST00000370496 PLXNA4Q9HCM2 1894 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 EPOPA6NHQ4 379 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 TISP43B9A030 160 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 KLRC4O43908 158 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 LINC00271P0C7V0 271 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 BMPR1AP36894 532 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 EHHADHQ08426 723 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 KCNA1Q09470 495 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 DPYDQ12882 1025 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 GRIK3Q13003 919 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 PNOCQ13519 176 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 SLC39A4Q6P5W5 647 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 CLEC17AQ6ZS10 378 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 MYLIPQ8WY64 445 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 POMGNT1Q8WZA1 660 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 TIGD1Q96MW7 591 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 CDX2Q99626 313 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-204ENST00000370496 PLVAPQ9BX97 442 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 CWH43Q9H720 699 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
COL9A1-204ENST00000370496 ANKRD63C9JTQ0 380 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 INPPL1O15357 1258 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 FOSL2P15408 326 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 PPM1AP35813 382 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 PBX3P40426 434 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 AFF1P51825 1210 aaKnown RBP16.2■□□□□ 0.18
COL9A1-204ENST00000370496 GPM6BQ13491 265 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 KYAT1Q16773 422 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 SEZ6Q53EL9 994 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 SLFN12LQ6IEE8 588 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 ACAP3Q96P50 834 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
COL9A1-204ENST00000370496 C5orf67F2Z3F1 127 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 RFXAPO00287 272 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 OGTO15294 1046 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 CSPG5O95196 566 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 SMC2O95347 1197 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 RB1P06400 928 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 IGFBP4P22692 258 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
COL9A1-204ENST00000370496 BCAR1P56945 870 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 PSMD2Q13200 908 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 KCNT2Q6UVM3 1135 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 EPM2AIP1Q7L775 607 aaPredicted RBP16.19■□□□□ 0.18
COL9A1-204ENST00000370496 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 SNX27Q96L92 541 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 HAPLN2Q9GZV7 340 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 TRIP11Q15643 1979 aa16.19■□□□□ 0.18
COL9A1-204ENST00000370496 ATG2AQ2TAZ0 1938 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 A0A0B4J269 797 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 CARNS1A5YM72 827 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 H3BNC9 293 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 CLTAP09496 248 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 CXCL8P10145 99 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 ARMCX5Q6P1M9 558 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 HS2ST1Q7LGA3 356 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 ZNF280BQ86YH2 543 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 KLHL23Q8NBE8 558 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 KIAA0895Q8NCT3 520 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
COL9A1-204ENST00000370496 SCFD1Q8WVM8 642 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 P2RX5Q93086 422 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 SMARCE1Q969G3 411 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 NRDE2Q9H7Z3 1164 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 RMND1Q9NWS8 449 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 DNAJB4Q9UDY4 337 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 AGO2Q9UKV8 859 aaKnown RBP16.18■□□□□ 0.18
COL9A1-204ENST00000370496 MYO9BQ13459 2157 aa16.18■□□□□ 0.18
COL9A1-204ENST00000370496 PTGESO14684 152 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 B4GALT3O60512 393 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 FGF18O76093 207 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 DDHD2O94830 711 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 RHOBTB3O94955 611 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 THP07101 528 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 TNFSF9P41273 254 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 STK4Q13043 487 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 KCNB1Q14721 858 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 PTPROQ16827 1216 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 BMT2Q1RMZ1 405 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 ZBTB41Q5SVQ8 909 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 ZNF507Q8TCN5 953 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 TMEM169Q96HH4 297 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 TMEM175Q9BSA9 504 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms