RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 POLR3FQ9H1D9 316 aaPredicted RBP11.49□□□□□ -0.57
CLRN3-201ENST00000368671 NXF3Q9H4D5 531 aaKnown RBP11.49□□□□□ -0.57
CLRN3-201ENST00000368671 TTC12Q9H892 705 aaPredicted RBP11.49□□□□□ -0.57
CLRN3-201ENST00000368671 ANKEF1Q9NU02 776 aa11.49□□□□□ -0.57
CLRN3-201ENST00000368671 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
CLRN3-201ENST00000368671 CCDC195A0A1B0GUA6 201 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 WNT7AO00755 349 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 INPPL1O15357 1258 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 TEX28O15482 410 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 NEMFO60524 1076 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 LYPLA2O95372 231 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GLUD1P00367 558 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GLRA2P23416 452 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
CLRN3-201ENST00000368671 ARL2P36404 184 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 RARRES1P49788 294 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 DSC1Q08554 894 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 TDGQ13569 410 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 TRIM29Q14134 588 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 AMHR2Q16671 573 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 ME3Q16798 604 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 C15orf39Q6ZRI6 1047 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 PALB2Q86YC2 1186 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GLYCTKQ8IVS8 523 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 DIS3L2Q8IYB7 885 aaKnown RBP11.48□□□□□ -0.57
CLRN3-201ENST00000368671 RNF168Q8IYW5 571 aaPredicted RBP11.48□□□□□ -0.57
CLRN3-201ENST00000368671 PIGOQ8TEQ8 1089 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 RABGGTAQ92696 567 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GTF3C6Q969F1 213 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 B3GALT6Q96L58 329 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 COLEC11Q9BWP8 271 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 KLK14Q9P0G3 267 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 GIT1Q9Y2X7 761 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 MYO10Q9HD67 2058 aa11.48□□□□□ -0.57
CLRN3-201ENST00000368671 LRRIQ4A6NIV6 560 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 JAK2O60674 1132 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 RFPL2O75678 378 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 ATP2B1P20020 1258 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 ANAPC15P60006 121 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 DSG1Q02413 1049 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 KIAA0319Q5VV43 1072 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 CWF19L1Q69YN2 538 aaKnown RBP11.47□□□□□ -0.57
CLRN3-201ENST00000368671 FUT10Q6P4F1 479 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 SLC27A1Q6PCB7 646 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 NSUN7Q8NE18 718 aaKnown RBP11.47□□□□□ -0.57
CLRN3-201ENST00000368671 CMASQ8NFW8 434 aaPredicted RBP11.47□□□□□ -0.57
CLRN3-201ENST00000368671 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 PIDD1Q9HB75 910 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 GPRC5CQ9NQ84 441 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 CACNG4Q9UBN1 327 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 DUSP12Q9UNI6 340 aa11.47□□□□□ -0.57
CLRN3-201ENST00000368671 CLUHO75153 1309 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 NARSO43776 548 aaKnown RBP11.46□□□□□ -0.57
CLRN3-201ENST00000368671 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.57
CLRN3-201ENST00000368671 EFEMP2O95967 443 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 CFHP08603 1231 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 MCM7P33993 719 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 CLCN5P51795 746 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 GUCY1B3Q02153 619 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 GRIK3Q13003 919 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 SIX5Q8N196 739 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 GSTCDQ8NEC7 633 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 RSAD2Q8WXG1 361 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
CLRN3-201ENST00000368671 SMG7Q92540 1137 aaKnown RBP11.46□□□□□ -0.57
CLRN3-201ENST00000368671 STAMQ92783 540 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 MTMR9Q96QG7 549 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 GPR62Q9BZJ7 368 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 TMEM60Q9H2L4 133 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 WDR6Q9NNW5 1121 aaKnown RBP11.46□□□□□ -0.57
CLRN3-201ENST00000368671 ADAM28Q9UKQ2 775 aa11.46□□□□□ -0.57
CLRN3-201ENST00000368671 MTCL1Q9Y4B5 1905 aaKnown RBP11.46□□□□□ -0.58
CLRN3-201ENST00000368671 TGM5O43548 720 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 PI15O43692 258 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 TADA2AO75478 443 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 NEFLP07196 543 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 NPR3P17342 541 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 RPL17P18621 184 aaKnown RBP11.45□□□□□ -0.58
CLRN3-201ENST00000368671 LIG1P18858 919 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 GET4Q7L5D6 327 aaPredicted RBP11.45□□□□□ -0.58
CLRN3-201ENST00000368671 ASCL5Q7RTU5 278 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 ZBTB8OSQ8IWT0 167 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 HASPINQ8TF76 798 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 MYADMQ96S97 322 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 TUFT1Q9NNX1 390 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms